Clostridium scatologenes: CSCA_4592
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Entry
CSCA_4592 CDS
T03803
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csq
Clostridium scatologenes
Pathway
csq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSCA_4592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csq03019
]
CSCA_4592
03110 Chaperones and folding catalysts [BR:
csq03110
]
CSCA_4592
03029 Mitochondrial biogenesis [BR:
csq03029
]
CSCA_4592
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csq04147
]
CSCA_4592
Enzymes [BR:
csq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CSCA_4592
Messenger RNA biogenesis [BR:
csq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CSCA_4592
Chaperones and folding catalysts [BR:
csq03110
]
Heat shock proteins
HSP60 / Chaperonin
CSCA_4592
Mitochondrial biogenesis [BR:
csq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CSCA_4592
Exosome [BR:
csq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CSCA_4592
Exosomal proteins of other body fluids (saliva and urine)
CSCA_4592
Exosomal proteins of breast cancer cells
CSCA_4592
Exosomal proteins of colorectal cancer cells
CSCA_4592
Exosomal proteins of bladder cancer cells
CSCA_4592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ZapA
Phage_TAC_5
Motif
Other DBs
NCBI-ProteinID:
AKA71717
UniProt:
A0A0E3JRH4
LinkDB
All DBs
Position
4968742..4970373
Genome browser
AA seq
543 aa
AA seq
DB search
MAKSILFSEEARRAMQAGVDKLANTVKVTLGPKGRNVILDKKFGSPLITNDGVTIAKEIE
LEDAYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGTNPILIRQGIR
MAVNKAVEEIKKSSKTVNGKEDIARVAAISAADEEIGKLIADAMEKVGNEGVITVEESKT
MGTELDVVEGMQFDRGYVSPYMVTDTEKMEANIEDAYILITDKKISNIQDILPVLEQIVQ
QGKKLLILGEDVEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGEVIS
EELGRELKDTTIEMLGRAESVKITKENTTIVNGKGDKTAIHDRVSQIKKQIEETTSDFDR
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALAATKAAVEEGIVAGGGTAYINA
IPEVAKLTSDVYDIKVGIDIITKALEEPVRQIATNAGVEGSVIIEKVKANEAGVGYDALH
DTYVNMLKVGIVDPTKVTRSALQNAASVASTFLTTEAAVADIPEKNNAPMPGGAPGMGMD
GMY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagtattttatttagtgaagaagcaagaagagcaatgcaggcaggagtagat
aagcttgctaatactgtaaaagttacacttggaccaaaaggaagaaacgttatattagat
aaaaagtttggatcaccacttataactaatgatggtgttactatagctaaagaaatagaa
ttagaagatgcatatgaaaatatgggagcacaattagttaaagaagttgctacaaagaca
aatgatgtagcaggagatggaactactacagcaacattacttgcacaagcaattataagg
gaaggattaaaaaatgttacagctggtactaatccaatacttataagacagggtataaga
atggctgttaataaagctgttgaagagataaagaaaagttcaaaaacagttaatggaaaa
gaagatatagctagagttgctgcaatatcagctgctgatgaagaaataggtaagcttata
gctgatgctatggaaaaagtaggtaatgaaggtgttataactgttgaagaatcaaaaact
atgggaactgaattagatgttgttgaaggtatgcagtttgatagaggatatgtaagccca
tatatggttacagatacagaaaagatggaagctaacatagaagatgcatatatattaatt
actgataagaaaatatcaaatattcaagatatattaccagtacttgaacaaatagttcaa
caaggtaaaaaattattgatcttgggtgaagatgtagaaggagaagcattagcaacttta
gttgttaataagctaagaggaacttttacttgtgtagctgttaaagctccaggttttggt
gacagaagaaaagaaatgcttcaggatatagctatacttactggtggagaagtaatatct
gaagaattaggaagagaattaaaagatactacaatagaaatgcttggaagagctgaatca
gttaaaatcactaaagaaaatactacaatagtaaatggaaaaggtgataagactgctatt
catgatagagtatctcaaataaagaaacaaatagaagaaactacatcagactttgataga
gaaaaattacaggaaagacttgcaaaacttgctggtggagtagctgtaatcaaagttggt
gctgcaactgaaacagaattaaaggaaagaaaattaagaatagaagatgcactagctgca
acaaaggctgctgttgaagaaggaatcgttgctggtggtggaacagcatatattaatgca
attccagaagtagcaaaacttacttcagatgtttatgatataaaagtaggtattgatata
ataacaaaagctcttgaagaaccagtaagacaaatagctacaaatgctggagttgaaggt
tcagttataattgaaaaagttaaagctaatgaagctggagtaggatatgatgctttacat
gatacttatgtaaacatgttaaaagtaggtatagttgacccaactaaggttacaagatca
gcacttcaaaatgctgcatcagtagcttctacattcttaactacagaagctgcagtagct
gatattccagaaaagaacaatgccccaatgccaggtggagcaccaggaatgggaatggac
ggaatgtactaa
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