Clostridium scatologenes: CSCA_4611
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Entry
CSCA_4611 CDS
T03803
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
csq
Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csq03009
]
CSCA_4611
Enzymes [BR:
csq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CSCA_4611
Ribosome biogenesis [BR:
csq03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CSCA_4611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AKA71736
UniProt:
A0A0E3GSA6
LinkDB
All DBs
Position
4990040..4990756
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AA seq
238 aa
AA seq
DB search
MERLDKILSNLGYGTRKEIKALVKQGLVEIDNEVVKDSGMKIDPEDKEIRVSGEMINYRE
NIYLIMNKPDGVVSATFDNYDETVIDLLEPEHQAFKPFPVGRLDKDTVGLLLITNDGELN
HRLISPKWHVDKVYYAEIDKPVDQNDSEKFEMGITLDDGYKCLPGKLKILESDENGAKVE
VTIQEGKFHQVKRMFNALGKNVVYLKRIKFGPMDLDLDLQEGEYRELSEIEIKSLKNV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattggataagattttatcaaatttaggatatggaacaagaaaagaaattaag
gctttggtaaagcaaggtttagtagagatcgataatgaagttgtaaaagatagtggaatg
aaaatagatcctgaagataaggaaataagagtttcaggtgaaatgataaattatagagaa
aacatatatttaataatgaataaaccagatggtgtagtttcagctacttttgataattac
gatgaaacagtaatagacttacttgagccagaacatcaagcatttaaaccatttcctgta
ggaagattagataaggatacagtaggacttttgttgattacaaatgacggagaattaaac
catagattgatatctcccaaatggcatgtagataaggtttattatgctgagatagataaa
cctgtagaccaaaatgattcagaaaaatttgaaatgggtattactttagatgatggatac
aaatgtcttcctggaaaacttaaaattttagaatctgatgaaaatggagcgaaagtcgaa
gttacgatacaagagggaaaatttcatcaggttaaaaggatgtttaatgcgttggggaaa
aatgtagtttatttaaaaagaataaagtttggaccaatggatttagatttagatttacaa
gagggagaatatagagaattgtctgagatagagataaaaagtttaaaaaatgtttaa
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