Entry |
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Name |
(GenBank) MutS2 family protein
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KO |
K07456 | DNA mismatch repair protein MutS2 |
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Organism |
csq Clostridium scatologenes
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:csq00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CSCA_4769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:csq03400]
CSCA_4769
DNA repair and recombination proteins [BR:csq03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CSCA_4769
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
5173889..5176252
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AA seq |
787 aa
MNEKALKVLEFYKIREQLKNYTSTGAAKDLIDELKPYDNIYEVREHIQETKEAFKLLVTK
GAPPFEGVYDVREGISRAGKGSTLMPGQLLKIAAILRAARRFQEYISHKEEEGGFRVLEN
ISQGIIPLKNIEDHIFVSIESEEQVSDRASTALYNIRKALKDKNSSVRDKVNSLIRSYSD
YLQDNLYTMRGDRYVLPVRAEHKGAVPGLVHDQSSSGATLYIEPMGLVNLNNEIKELMLK
EKAEIDRILAYLSNEIYGSIIAVRNDADIIWELDFIFAKAKFASELNCTAPNVNDEGVID
IVQGKHPLIDRKVVVPLDVYLGKGFTSLVITGPNTGGKTVTLKTVGLLHIMALSGLMIPA
RENSTVSFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIINEADDESLVLFDELGAGTDP
TEGAALAVSILENLKSRGCRIVATTHYSELKVYALKVDGVENASVEFDVETLRPTYRLLI
GIPGKSNAFEISRRLGLADYIIHDAKENINSETLQFEDLIENLQEKSVKAEANAREAEML
KLEAAKIKDKYEEKMGSLQNAREKAVINAQREAKRIIKEAKEEADNILKEMRELEKAGYA
SDVRHKLEEERRKLSQKLDKIDEKVNKVKRDDGEELKNVREGEEVFVPSLNQKVIVISKP
DNKGNVQVQAGIMKIEVKLKDLRAITGAVNKEEKKKIKREAKLNLKSVASSVDLRGMDSL
EAVYTADKYLDEAYLAGLKEVTLIHGKGTGVLRNTITDMLKHHSHVKKYRLGEYGEGGTG
VTVAELR |
NT seq |
2364 nt +upstreamnt +downstreamnt
ttgaatgaaaaagcattaaaagtactagaattttataagataagagaacagttaaagaat
tatacaagtactggtgcagccaaggatttaatagatgaattaaaaccttatgataatata
tatgaggttagagaacatattcaagaaacaaaagaagcttttaaacttttagtgacaaag
ggagctcctccatttgaaggtgtttatgatgtaagagaaggtataagtagagcaggtaaa
ggatctactttaatgccaggacagcttttaaaaatagcagcaatacttagggctgctaga
agatttcaagaatatataagtcataaagaggaagaaggaggctttagagttttggaaaat
atatctcagggtattattccattaaagaatatagaggatcatatatttgtgtctatagaa
agtgaagagcaagtttcagatagagcaagtacagctctttataatataagaaaagcttta
aaagataaaaattcttctgtaagagataaagtcaattcacttataagaagttattcagat
tatcttcaggataatttatatactatgagaggagatagatatgttttacctgtaagagct
gagcacaaaggagcagttcctggacttgtgcatgatcaaagttccagtggagctacctta
tatatagaacctatgggattagtcaatttaaataatgaaataaaagaacttatgttaaag
gaaaaggcagaaatagatagaatattagcttacctttcaaatgaaatttatggaagtata
atagcagtaagaaatgatgcagatataatatgggaactagatttcatttttgctaaggct
aaatttgctagtgaacttaattgtacagcacctaatgttaatgatgaaggtgttattgat
atagtacaaggaaaacatcctctaatagatagaaaagttgtagtacctttagatgtgtat
ttaggtaaaggattcacatcattagttataactggtcctaatacaggtggtaagacagtt
acattaaaaacagtaggattattgcatattatggctttaagtggccttatgattccagct
agagaaaattctactgtaagcttttttaaagaagtatttgcagatattggagatgaacag
agtatagaacaaagtttatcaaccttttcatcccacatgactaatattgtaaatataatt
aatgaggcagatgatgagtcactagtactttttgatgaattaggggctggaacagatcca
acagaaggagcagcattggctgtatctattttagaaaacttaaagagtagaggttgtaga
atagttgctacgactcattatagtgaacttaaagtttatgctttaaaagtagatggagta
gaaaatgcatctgtagaatttgatgtggaaacattgagacctacgtatagacttttaatt
ggaatacctggtaagtcaaatgcatttgaaatatctagaagattaggacttgcggattat
ataattcatgatgcaaaagaaaatataaatagtgaaacacttcaatttgaagatttaata
gaaaatcttcaagaaaaaagtgtaaaagctgaagccaatgcaagagaagcagagatgtta
aagctagaagcggctaaaattaaagataaatatgaagaaaaaatgggatcacttcaaaat
gctagagaaaaagcggtaataaatgctcaaagggaagcaaagagaattataaaggaagct
aaagaagaagcagataatattcttaaggaaatgagagaattagagaaagctggttatgct
tcagatgtaagacataagcttgaagaagaaagaagaaagctatcacaaaaacttgataaa
atagatgaaaaagttaataaagtaaaaagagatgatggtgaggagcttaaaaatgtaaga
gaaggagaagaagtttttgtaccttctttaaatcaaaaggtaatagttatatccaaacca
gataataaagggaatgttcaagttcaagctggaattatgaagatagaagtaaaactaaaa
gatttaagagcaataactggtgctgtaaataaagaagagaagaaaaaaataaaaagagaa
gcaaagcttaatttaaaatctgtagcttcatctgtggatttaaggggaatggattcttta
gaagcagtgtatactgcagataaatatttggatgaagcgtatttagcaggattaaaggaa
gtaactttaattcatggaaaaggaacaggtgtattaagaaataccataacagatatgctc
aagcaccattctcatgtaaaaaagtatagactaggggaatatggtgaaggcggtactgga
gttacagtagctgaacttagatag |