KEGG   Clostridium scatologenes: CSCA_4938
Entry
CSCA_4938         CDS       T03803                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
csq  Clostridium scatologenes
Pathway
csq03030  DNA replication
csq03410  Base excision repair
csq03420  Nucleotide excision repair
csq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CSCA_4938
   03410 Base excision repair
    CSCA_4938
   03420 Nucleotide excision repair
    CSCA_4938
   03440 Homologous recombination
    CSCA_4938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csq03032]
    CSCA_4938
   03400 DNA repair and recombination proteins [BR:csq03400]
    CSCA_4938
Enzymes [BR:csq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CSCA_4938
DNA replication proteins [BR:csq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CSCA_4938
DNA repair and recombination proteins [BR:csq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CSCA_4938
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CSCA_4938
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_2 Imm50 HHH_5
Other DBs
NCBI-ProteinID: AKA72063
UniProt: A0A0E3MAG7
LinkDB
Position
5351442..5354084
AA seq 880 aa
MSKEKLLILDGNSLMNRAFYALPPLTNSQGLHTNGVYGFVTMLLKMREEIGPNYIVCTFD
RSAPTFRHNEYKDYKAGRKRMPEELAEQFPVVKKLLNLLSISMFEIDGFEADDLIGTLSV
YAEKKDIEVYIVTGDKDALQLATDNVKVVITKKGITEKEIYDKNRMISEFEVTPTQFIDV
KGLMGDKSDNIPGVPGVGEKTAFKLIKEYGSIENVLNNIDNISGKKIKENLMQYSEQAIF
SKKLATIMVNVPIEIDLNEIKSKENYDVEGVKNLFIELQFKSLIDKVIGEKELKEEIEKE
DIKVDFKNISNINDLKKFKKDIISIAKDEILYLTFKVVDGNVYSKSYIEKIFLNINSRNY
VIELEKIYEEDNEETLKCLKDIFENDKIEKVSHNVKVPYTVFKKMGINFTSIKFDTEIAA
YLIDSSRGEYELNSIIQDYLKIMLQGEDDEIRVKETSLLKDVFENLNRQIKELNMEELLY
EVEQPLTLVLAAMEYEGFKVDKTKLEELGEKFRIEIDKLQKDIYGLAEEEFNVNSPKQLG
KILFEKLDLPVIKKTKTGYSTNAEVLEQLLDKHPIIEKITYYRQFTKLYSTYIEGLKAVI
DEDGKIHSSFNQTVTTTGRLSSTEPNLQNIPIKYEMGREIRKVFVPEDENSIILSADYSQ
IELRVLAHIADDENLISAFFNHSDIHTKTASEVFKVPIDQVTKLQRSNAKAVNFGIVYGI
GDFSLAKDLKISRKEAKNYIDTYFERYPGVKRYMDTVIKQAEDNLYVTTIMNRRRFIPEI
KNSKKMVKAFGERLAMNTPIQGSAADIIKMSMVNVYNTLKSKNFKSKVILQVHDELILNV
YKDELEEVKELVKNQMEDVMKLRVPLEVDISVGDNWYEAK
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgtctaaagaaaagttattaatacttgatggaaatagtttaatgaatagagcgttttat
gcactgccaccgttaactaactcccaaggactacatactaatggagtatatggttttgta
acaatgcttttaaaaatgagagaagaaattggtcctaattatatagtttgtacttttgat
agaagtgctcctacatttagacacaatgaatataaagattataaagcaggtagaaaaaga
atgccagaggagcttgcagagcagtttcctgtagtaaaaaagctattaaatctgctttct
ataagtatgtttgaaattgatggatttgaagcagatgatcttataggaactctttctgta
tatgcagaaaagaaagatatagaagtttatatagtcacaggagataaagatgcgcttcaa
ttagcaacagataatgtaaaagttgttataaccaaaaaaggaattacagaaaaagagata
tatgacaagaatagaatgatttcagaatttgaagttacgccaactcaatttatagatgta
aaaggtctcatgggagacaaatcagataatatacctggtgtcccaggagttggtgaaaaa
acggcctttaagcttataaaagaatatggaagcatagaaaatgtattaaataatatagat
aatattagtgggaaaaaaataaaagaaaatttaatgcagtatagcgaacaggcaatattt
agcaagaagttagctactatcatggttaatgttcctatagaaatagatttaaatgaaata
aaatctaaggaaaattatgatgtagaaggtgtaaagaatttatttatagagcttcaattt
aagtcacttatagataaagttataggtgaaaaagaattaaaggaagaaattgaaaaagaa
gatattaaagttgactttaaaaatataagtaatataaatgatttaaaaaagtttaagaaa
gatataatttcaattgcaaaggatgaaattttatacttaacttttaaagttgtagatggc
aatgtttactcaaaaagttatatagaaaagatatttttaaatataaatagtagaaattat
gtaatagaacttgaaaaaatatatgaagaagataatgaagagacattaaaatgccttaag
gatatatttgaaaatgataaaatagaaaaagtaagtcataatgtaaaagttccatatact
gtatttaagaaaatgggaataaactttaccagtataaaatttgatacagaaatagcagct
tatttaattgattcttctagaggtgaatatgaattaaattctatcatacaggattatctt
aaaataatgcttcaaggagaagatgatgaaattagagtaaaggaaacttctcttttaaaa
gatgtctttgaaaacttaaatagacaaataaaagaattgaatatggaagaactcctatat
gaggtagaacaacctcttacattggtattggcagctatggaatatgaaggctttaaggtt
gataagacaaaattagaggaactaggagaaaagtttaggatagaaatagataaacttcag
aaggacatatatggtttggcagaagaagaatttaatgttaattctcctaaacagcttggg
aagatattatttgaaaaacttgatttgcctgtaattaaaaagactaaaacaggatattcc
actaatgcagaagttttggagcagcttttagataagcatcctattatagaaaaaataact
tactatagacaatttactaagctttattctacatatattgaaggactaaaagctgtaatt
gatgaggatggaaaaatacattctagctttaatcaaacagttactactacaggaagattg
tcaagtactgaacctaatcttcaaaatataccaataaaatatgaaatgggtagggaaata
agaaaagtatttgtgcctgaagatgaaaattcaataatactttcagcagattattcacaa
atagaacttagagtgcttgctcatatagctgatgatgaaaatttaataagtgcctttttt
aatcatagtgatattcatactaaaactgcatcagaagtgtttaaagttcctatagatcag
gttacaaaactacaaagaagtaatgctaaggctgtaaactttggaatagtttatggtata
ggcgactttagcttagctaaggatttgaagatatcaagaaaagaagccaagaattatata
gatacttattttgaaagatatccaggtgtaaaaaggtatatggatactgttataaaacag
gcagaagataatttgtatgtaactactataatgaatagaagaaggtttatacctgaaata
aaaaattctaaaaagatggtaaaggctttcggtgaaagattggccatgaatacacctatt
caaggtagtgctgcagatataataaagatgtctatggtaaatgtatataacactttaaaa
agtaaaaattttaagagtaaagtaatacttcaagtacatgatgaacttattttgaatgta
tataaggatgagttagaagaagtaaaagaattagtgaaaaatcaaatggaagatgttatg
aaattaagagtacctttggaagttgatattagtgttggagataattggtatgaagcaaaa
taa

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