Clostridium scatologenes: CSCA_4963
Help
Entry
CSCA_4963 CDS
T03803
Name
(GenBank) penicillin-binding protein transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
csq
Clostridium scatologenes
Pathway
csq00550
Peptidoglycan biosynthesis
csq01100
Metabolic pathways
csq01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CSCA_4963
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CSCA_4963
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csq01011
]
CSCA_4963
Enzymes [BR:
csq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CSCA_4963
Peptidoglycan biosynthesis and degradation proteins [BR:
csq01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CSCA_4963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AKA72088
UniProt:
A0A0E3M8Y4
LinkDB
All DBs
Position
5379246..5381906
Genome browser
AA seq
886 aa
AA seq
DB search
MEGKKERKFTRYTALIVIMVIIFTAIASRLFFLQILDGELYSEKANNKSIREIPEAAPRG
KILDKNGSVLASSNLIYMLVYNQTDESDKHFFDTMSKVFKLLDENGETQKDDFELKVNPY
SFQFRGDDDKTKRMLEIKFKTDRGFADEIKNKLYKGKKTDLTSAEKAKVEEELLKITPEE
TFKKLVKQYKIDDKKYSVDEQRRFMIIKDTLKMNSFSGYKPAVVATNIKKETAFKFYQML
NEFPGIDVTTQPMRTYENGELASSILGYISKIDSNDDKYAEKGYDASTDYTGKAGIEGTF
EDRLKGSKGGKIVKLNKQGRILEELGKRDPYPGQTIQLTIDKDVQAATEKALDDRMNYLR
ANPSEQQGSYTANATRGAAVAIDVNTGAVVALASRPGFDPNAFAAPGGLSSDLYNTYYPD
IAEAGKRYIKNMGISGGSEEDTLNKLFPVDKSVKGKTVRQDAKDILPKPLFNYATQSRSM
PGSTFKMMTAIAGLESGVITPDFGMNDEAKFDKGGNHWVHFDSDGPNGWVDLTKAIEKSS
NPYFMTVGKMLRNKYNDDILAKYAWKFGLGADPTSDSKKSTGLEIPEAFGQVFNSWSLKN
TYSQTYLWTTMETLKAGSDDRGNKFTSIDIYDRDGDSSKVKSIKSDIKKQIQSSIKDGDK
AFNKDTYKGLINNLIQEDPQYSGKSISDKEIKSIISAIYYITVSDANSQIRAGFSMYDAS
IGQGIDAFTPVQLANYIATIANGGTRYNVHLVDKFLDANGKLIEQVKPEIAEKTGVKQET
LDAVKAGMNAVNEKGTAAQAFQGFTIPTAGKTGTATIANDQESFGRTDTAVYVGFAPSDK
PEIAVCVMLYDGGHGSGAAYVARSMYEAYFKVGSSNAPKSNTSTQN
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtaagaaagaaagaaaatttactcgttatactgctttaatagtaataatggta
attatatttactgctattgcttcaagattattttttcttcaaatccttgatggtgaatta
tatagtgaaaaagcaaataataagtccataagagagataccagaagctgcaccaagggga
aagattttagataaaaatggttccgtattagcttcaagtaatttaatttatatgttagtt
tataatcaaaccgacgaaagtgataagcatttttttgatactatgagtaaggtatttaaa
ctgcttgatgaaaatggagaaactcaaaaagatgattttgaacttaaagtaaatccatat
agttttcaatttagaggtgatgatgacaaaactaagagaatgcttgaaataaagtttaaa
acagatagaggatttgcagatgaaataaaaaataagctatataaaggtaaaaaaactgat
cttacaagtgcagaaaaagcaaaagttgaagaagagcttcttaaaataacaccagaagaa
acctttaagaagcttgtaaagcaatataaaattgatgataaaaagtactctgtagatgag
cagagaagatttatgataataaaagatacattaaaaatgaatagtttttcaggatataag
ccagcagtagttgcaactaatataaaaaaggaaaccgcatttaaattttatcaaatgtta
aatgagttccctggtatagatgtaactacacagcctatgagaacttatgaaaatggagag
ttagcatcttctattttaggatatatatctaaaatagattcaaatgatgataaatatgca
gaaaagggatatgatgctagtacagattatacaggtaaagctggaattgaaggtactttt
gaggatagacttaagggatctaaaggtggaaaaattgtaaaacttaataaacaaggaaga
atacttgaagaacttgggaaaagagatccttatccaggtcaaacaattcaacttactata
gataaagatgttcaggctgccacagaaaaggcattagatgataggatgaactatttaaga
gcaaatccttctgaacagcaggggtcttatacagctaatgctactagaggagcagctgta
gctatagatgtaaatactggtgctgtagtagcactagcaagcagaccgggttttgatcca
aatgcttttgcagcacccggaggtttatcttctgatttgtataatacttattatcctgat
atagcagaagctggaaaacggtatattaaaaacatgggtatttcaggtggcagtgaggaa
gatacattaaataaattatttcctgtagataaaagtgtaaaaggtaaaacagtaaggcaa
gatgctaaagatatattaccaaaaccattatttaattatgctactcaatcaagatctatg
ccaggttctacttttaaaatgatgacagcaattgcagggcttgaaagcggtgtaataact
ccagattttggtatgaacgatgaagccaagtttgataaaggcggaaatcattgggtacat
tttgactcagatggtccaaatggatgggtagatttgacaaaagctatagaaaaatccagt
aacccatattttatgactgtaggtaaaatgcttaggaataaatataatgatgatatttta
gctaaatatgcatggaaatttggattaggagctgatcctacttcagattctaaaaaatct
acaggactagaaatacctgaggcgtttggtcaagtatttaacagctggtctttgaaaaat
acttattctcaaacgtatttatggacaactatggaaactttaaaggctggatcagatgat
agaggaaataagtttacttccatagatatatatgatagagatggggattcaagtaaggtt
aaaagcataaaaagtgatataaagaagcagatacaaagctctataaaagatggagataaa
gcttttaacaaggatacttataagggattaattaacaatttaatacaggaagatcctcaa
tatagtggtaaaagtataagtgacaaagaaataaaatctattataagcgctatttattat
ataacagtttccgatgctaacagccagattagagcaggatttagtatgtatgatgcttct
ataggtcaaggtatagatgcattcactccagttcaattggcaaattatattgcaactatt
gccaacggaggaacaagatataatgtacatcttgtagacaaattcttagatgctaatgga
aaactaattgagcaagttaagcctgaaattgcagaaaaaacaggagttaaacaggaaact
ttagatgcagttaaagctggaatgaatgcagttaatgaaaaaggtactgcagcacaagcg
tttcaaggttttactataccaacagcaggaaaaacaggtacagctactatagctaatgat
caagaaagctttggaagaacagatacagcagtatatgttggatttgcaccttcagataaa
cctgaaatagctgtatgtgttatgttgtatgatggtggtcatggtagtggagcagcttat
gttgcaagaagtatgtatgaagcatattttaaagtaggcagtagtaatgctccaaaaagc
aacacgtctacacaaaattaa
DBGET
integrated database retrieval system
