Clostridium scatologenes: CSCA_4964
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Entry
CSCA_4964 CDS
T03803
Name
(GenBank) penicillin-binding protein transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
csq
Clostridium scatologenes
Pathway
csq00550
Peptidoglycan biosynthesis
csq01100
Metabolic pathways
csq01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CSCA_4964
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CSCA_4964
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csq01011
]
CSCA_4964
Enzymes [BR:
csq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CSCA_4964
Peptidoglycan biosynthesis and degradation proteins [BR:
csq01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CSCA_4964
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Unstab_antitox
WSLR
Motif
Other DBs
NCBI-ProteinID:
AKA72089
UniProt:
A0A0E3K427
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All DBs
Position
5382067..5384721
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AA seq
884 aa
AA seq
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MEGRKERKFTRYTALIVIMVIIFTAIAGKLFFLQVLAGEFYSEMANNKSIREIAEAAPRG
NILDKNGSVLAKSVQTYKLVYNQTDESDKHFFDTMSKVFDILDKSGETQKDDFELKINPY
SFQFRGDDDETKRILEIKFKTERGLVDEIKNRLYKNKKNKLTEVEKAKVDEELLKITPEE
TFKKLMKKYKIDDKKYSIDQQRRFMIIKDTLKMNSFSVYKPAVVATNIKQETAFKFYQML
NELPGIDVIREPMRSYPNGELASAVLGYISKIGSNDDKYIEKGYDVSTDYIGQSGIEGAF
EDRLKGSKGGEIAKLNKQGRKIEELGKRDPYPGQTIQLTIDKDVQKATEDALDQRMKELR
DNPSQGSSYTANATRGAAVAIDVNTGAVIALVSRPGFDPNAFAAPGGLSSDLYKQYYPDI
DDEGKKYIERMGIAGENEEDTLNKLFPVDISVKVKTIRKDLKDTLPKPLFNYATQSRAMP
GSTFKMMTAIAGLETRVITPEYGMDDEMYFDKGGGMAGRVYFRDDGRNGWVDLARAIEKS
SNPYFMTVGKMLRDKYDDNILAKYAWKFGLGADPTSSSANYSTGLEIPEAFGQVYNLWSL
KNTYAQTYLWKTEEVLKSGSDDKGNKCTSIDIYDRDGDSSKVKKIKSDIKTQIQNSIKDG
DKAFNKDTYTSLINNLIQEDPQYKDKNISYKEIKAVVNIIYNVTVSDANSQIRAGFSMYD
ASIGQGIDAFTPVQLANYIATIANGGTRYSVHIVDKFLDADGKLIEQVKPEIAEKTGVKQ
ETLDAVKAGMNAVNEKGTAAEAFKGFTIQTAGKTGTATISNDAQSFGRTDTAVYVGFAPS
DNPKIAVCVMIYDGGHGSGAAYVARSMYEAFFKISNNNNSKNGN
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtaggaaagaaagaaagtttactcgttatactgctttaatagtaataatggta
attatatttactgctattgctggaaaattattttttcttcaagttctagctggtgaattt
tatagtgagatggcaaataataagtccataagagagatagcagaagctgcaccaagggga
aatattttagataaaaatggttcggtattggctaaaagtgttcaaacttataagttagtt
tataatcaaacagatgaaagcgataagcatttttttgatactatgagcaaggtatttgat
attcttgataaaagtggagaaactcaaaaagatgattttgaacttaagataaatccatat
agctttcagtttagaggtgatgatgacgagactaaaaggatacttgaaataaagtttaaa
acagagagaggccttgtagacgaaataaaaaataggctatataaaaataaaaaaaataag
cttacagaggtggaaaaagcaaaagttgatgaagaacttcttaaaataacaccagaagaa
acttttaaaaaacttatgaagaaatataaaattgacgataaaaaatactctatagatcag
cagagaagattcatgataataaaagatacattaaaaatgaatagtttttctgtatataaa
ccagcagtagttgcaactaatataaagcaggaaactgcatttaaattttatcaaatgtta
aatgagttacctggtatagatgtaattagagaacctatgagaagctatccaaatggagaa
ttagcatccgctgttttaggatatatatctaaaataggttcaaatgatgataaatatata
gaaaaaggatatgatgttagtacagattacataggtcaatctggaattgaaggtgctttt
gaggatagacttaagggatctaagggtggtgaaattgcaaaacttaataagcaagggaga
aaaattgaagagcttgggaaaagggatccttatccaggacaaactatacaacttacaata
gataaagatgtacaaaaagctacagaagatgcgttggatcaaagaatgaaggaacttaga
gataatccttcacagggcagctcttatacagctaatgctacaagaggagcagctgtagct
atagatgtaaatactggtgctgtaatagcattagtcagcagaccaggttttgatccaaat
gcttttgcagcaccaggtggattatcttcagatttatacaaacagtattatccggatata
gatgatgagggaaaaaagtacattgaaagaatgggtattgcaggagaaaatgaagaagac
acattaaataaattgtttcctgtggatataagtgtaaaagttaaaaccataagaaaggac
cttaaagatacattaccaaagccactatttaattatgcaactcaatcaagagctatgcca
ggatccacttttaaaatgatgacagcaattgcaggtcttgaaaccagagtaataactcca
gagtatgggatggatgatgaaatgtactttgataaaggaggcggaatggctggaagagta
tattttagagatgatggcagaaatggatgggtagatttagcaagagctatagaaaaatca
agtaacccatattttatgactgtaggtaaaatgcttagagataagtatgatgataatatt
ttagctaaatatgcatggaaatttggattaggagctgatcctacttcatctagtgctaat
tattctacaggattagagataccagaagcttttggacaagtatataacctttggtcttta
aaaaatacttatgctcaaacatatttgtggaaaactgaggaagtattaaaatccggatca
gatgataaaggaaataagtgtacttctatagatatatatgatagagatggagattcaagt
aaggttaaaaaaataaaaagtgatataaagactcagatacagaactcaataaaggatgga
gataaagcttttaataaggatacttatacaagtttaattaacaatttaatacaagaagat
cctcagtataaggataaaaatataagttacaaagaaataaaagctgtagtaaatattatt
tataatgtaacagtttctgatgccaacagccagattagagcaggatttagtatgtatgat
gcttccataggacaaggcatagatgcatttacgccagttcaattggcaaactatattgca
actattgctaatggtggaacaagatatagtgtacatattgtagataagtttttagatgct
gatggaaagctaattgaacaggttaagcctgaaattgcagaaaaaacaggggttaaacag
gaaactttggatgcagttaaagctggaatgaatgcagttaatgaaaaaggtactgcagca
gaggcatttaaagggttcactatacaaacagcaggaaaaacaggtacagcaactatatca
aatgatgcacaaagctttggaagaacagatactgcagtttatgttggatttgcaccttca
gataatcctaaaatagctgtatgtgttatgatatatgatggtggtcatggaagtggagca
gcttatgttgcaagaagtatgtatgaagcatttttcaaaataagtaataataataacagt
aaaaatggtaattag
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