Clostridium scatologenes: CSCA_5172
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Entry
CSCA_5172 CDS
T03803
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
csq
Clostridium scatologenes
Pathway
csq03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CSCA_5172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
csq03011
]
CSCA_5172
Ribosome [BR:
csq03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CSCA_5172
Bacteria
CSCA_5172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
PCB_OB
CsrA
PTS_IIB
Motif
Other DBs
NCBI-ProteinID:
AKA72297
UniProt:
A0A0E3MAP5
LinkDB
All DBs
Position
5590601..5591767
Genome browser
AA seq
388 aa
AA seq
DB search
MAEEIKDTNSMKEFMEDIESSMKSIRRGEIVKGKIISVTEKGAIVNIGYMSDGILSKDEV
VENEEDNLMDILKENEEICVYVLDMNDGEGNVLLSKKVADKIKSWDELEKIFEEKADIET
TVKEVVKGGVVTYIKGIRAFIPASQLSLSYVEDLKSFVGKTLTVKIIEFDKDKEKVVLSR
KVIEKVEAESKKQQLLNSLKPGEKRSGVVSRLAKFGAFVDLGGLDGLIHVSELSWKRVNN
PSDVVSVGDKVEVYILSVDKESNKIALALKDVNENPWKSIGDKFKIGDIVDGEVSKLASF
GAFVGIQPGVEGLVHISEISEDRIAKPSDVLSLGDKVRVKILDIDDKENRISLSIKDAVE
KPKEDLDKFNDNESAGTSLADLLKDFKF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaattaaagatacaaactctatgaaggaatttatggaggatatagaatct
tctatgaaatcaattagaagaggagaaattgtaaaaggaaagatcatatctgtaacagaa
aaaggtgcaatagtaaatataggatatatgtcagatggaatattatccaaagatgaagtg
gttgaaaatgaagaagacaatcttatggatattttaaaggaaaatgaagaaatatgtgtt
tatgtattagacatgaacgatggagaaggtaatgtgcttttatctaaaaaagtagcagat
aaaatcaagtcttgggatgaattagaaaagatttttgaagaaaaagcagatatcgaaaca
acagtaaaagaagtagtaaagggtggagttgtaacatacataaagggtataagggcattt
atacctgcatctcagttgtcattatcttatgtagaagatttaaaatcatttgtaggtaaa
acattaactgtaaaaataatagaatttgataaagataaggaaaaggtggttctatccaga
aaagtaatagagaaggttgaagctgaaagcaaaaaacaacagcttctaaatagtcttaaa
ccaggagaaaaaagaagcggtgtagtaagtagacttgctaaatttggagcttttgttgac
ttaggaggattagatggacttattcatgtttcagaattatcatggaagagagttaataat
ccatcagatgtggtttctgtaggagataaggttgaagtttacatattatctgttgataaa
gaaagtaataaaatagcattagcattaaaagatgtaaatgaaaatccatggaagagtata
ggtgataagtttaaaattggagatatagtagatggtgaagtttcgaagcttgcaagtttt
ggggcttttgtaggaattcagcctggtgtagaaggtcttgttcatatttcagaaatatca
gaggacaggatagcaaagccttcagatgtattaagtttaggagataaggttagagtaaaa
atactagatatagatgacaaggaaaatagaattagtctaagtattaaagatgcagttgaa
aaaccaaaagaggatttagataaattcaatgataatgaaagtgcaggtaccagcttagca
gatttattaaaagattttaaattttaa
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