Clostridium scatologenes: CSCA_5255
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Entry
CSCA_5255 CDS
T03803
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
csq
Clostridium scatologenes
Pathway
csq03030
DNA replication
csq03430
Mismatch repair
csq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSCA_5255
03430 Mismatch repair
CSCA_5255
03440 Homologous recombination
CSCA_5255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csq03032
]
CSCA_5255
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_5255
Enzymes [BR:
csq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSCA_5255
DNA replication proteins [BR:
csq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSCA_5255
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSCA_5255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AKA72380
UniProt:
A0A0E3K5N5
LinkDB
All DBs
Position
5668186..5668776
Genome browser
AA seq
196 aa
AA seq
DB search
MKKIFLDTETTGLEPGQIIQLTYCVCDINSRGEEKVCFAKNFFFDVDYVEPSAEAVHGFS
VEKLKNLSMGQVFQDVASEVAEDLEGGIFIAHNVKFDQKFVTAEFDRLNNIDWNPNKFFC
TMQYFKSKVNAKTRNGRPKNPRLEETMDFLGVEQNKVLQGAKKLFSCDDVDFHDARYDVA
GLVSCYYRAKKLGYDL
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatttttttagatacagaaactacagggcttgaaccagggcaaattatacag
cttacatattgtgtttgtgatataaattctagaggggaagagaaggtttgttttgcaaag
aattttttctttgatgtagattatgttgaaccgtctgcagaagctgtacatggctttagt
gtggaaaaattaaaaaacctatctatgggacaagtgtttcaagatgtagcttcagaagta
gctgaagatttagaaggaggaatttttattgcacataatgtaaagtttgatcaaaaattt
gttactgctgaatttgatagattaaataatatagattggaatcctaataaatttttttgt
actatgcagtattttaaatcaaaagtaaatgcaaaaacaagaaatggtaggcctaaaaat
ccaagattggaagagacaatggatttccttggggtagaacaaaataaggtacttcaaggt
gctaaaaagctttttagttgtgatgatgttgattttcacgatgctagatatgatgtagca
ggacttgtatcttgttactatagagctaaaaaattaggttatgatttgtag
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