Comamonas squillarum: N4T19_00005
Help
Entry
N4T19_00005 CDS
T10846
Name
(GenBank) phage tail length tape measure family protein
Organism
csqu Comamonas squillarum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMP_2
Motif
Other DBs
NCBI-ProteinID:
UXC18563
LinkDB
All DBs
Position
join(5109461..5111300,1..3866)
Genome browser
AA seq
1901 aa
AA seq
DB search
MSTENQKFGFTVAAENEASQTFQQIGNDADKMAAKVNQAGQKAAEGVGAIGDGAENAAEK
LTRAESRIASAMRKATEETLQAAQAAKSLSGSFELKMDMRGMDASRLQPYIKALRDAESE
LSVFKAAEAEVGRQNVFAEKHRQAQQLAKSSEYVRFWNQELDRMAAAEKRAASESAFLNS
LREQSSAIGKTRADLLELQAAQLGVATQAAPMIAKLREAESGVGKVGMSAAAMSAALRNV
PAQFTDIVVSLQAGQAPLTVLLQQGGQLKDMFGGAGAAAKALGGYVLGLVNPFTVAAAAA
ATLGLAYYQGHQEQIAFVKALTLSGNAAGVTTTQLTEYARQIDAIVGTQAQATAALVAFT
QAGVTGADQLRKYAQTAIEWEKATGQAVGDTAKQFADLQKDPLSAVVKLNEGMNFLTADV
YEQIKALNDQGKSAQASAVAMDALDSVMRDRSKTIKESLGYLERAWNAIKGAAADAWDAM
LNVGRPNTINDRLGAVRKELNSLIDQQGWGETGGGAATGRVTAETKRRVQERIEALRAEE
WQLENNAAAEQMNAAAQEVSAKATQASIKWQETLDQHLTKSEKLTRALAAAREEYNNKLS
FVPQDDLKKRSELAQQLAKVEASLRDQYKEKGPSKTGGVSMSDTRLSGLEAQLEAARQYG
KQLQELGLAAKDLNAGERESLKISAEMEKATDAKTVAKLKNAKATADELGAQLRSNETSE
ESMKAKDALIKGMYKSAEATEEEAARLEASLSVYGKARIEIERMTLAKLQQQKADMGLIA
NPEYMAALDKQIAGQQAVIAGLEKLDFKKFSETMGKSLDAAKEELALQQEGISLLGMDEV
ARRKILAVRKIDLEVAKQIAEVEKTKYSDNSDDNEREKAARRKLIWEKSEVDTQIAIGKI
QEEYALQNAEKYNDIFRQGFADFVNNGADGLKAFGKSLKTTILTSASDALYQAFAQKFVM
NVAANVTGLIGAGAGFLASLFGGGSEGSAGGNVGNLISAGSTGYSLYSGQGLVGQGSRYL
ANLVGWGGEAAPAAGYAAPAGAGFAEGAGGAAIPEASWASSASQWVASGGWVMAVPLIAA
YLGGMFKEEKQVGSGITGELGGDLYGYQLMRESGSLFGGPKYRYLVAEKEIEQSKAEIER
LKKEIADNPDDKRNAYRERQIQQQYSRLEMLSQYDGAIEGSKGPIKVLQDAFLGMREDTA
SRADSLGLDGDAIRAMRVTLGLDEIHPDTGGKGLELTGLTQEEASAKVQQALAQANEELA
RSVLGHWEEQTREVTRTVWDNVELPTDGDTQQYGRIGREVTETITEQVFVMSEYVRTGET
AVQALTRLSDSLYSVNSVFDMLGLTLMDTSLAGADMASDIIDAFGGADKFSAATGNYYDK
FYTDQEKVKNQTRLLNDQLKKLGIETMPASREAFKEYINGIDKSTEEGQKLFASLLGLVD
VFDMIYTSAENIASLKGDLQIQLLRAKGNDAEATRLERAKQIKELEKFNDPELVKLQVEI
WDTEDKAKADEAAKTLAQQNLQAAISREKEYWNQFAADAKEAFTKASSYVDLFKGSAKSL
RASVDDMANSQAAAGMVYIEQALENARRGLGFGDYDQTQSAINAATGGLVMDNYATQAEL
DYDKKVLAGQLDELGEFAELAKTDAQKQIDLATSQLKRLDDIQTFWQTFGEDQVDATLSV
TDAVNALYKLLDPKEQERIKKEEAAKAGLDGGGAKPTTTPTGGGSLGGSVTGSNRVTVVG
LTADGRAIFSNGEIGQTPAGQTTYNSTGQMNSNGYSLAEFERFKTSGEFEWDAKLGQWRK
RASFAVGTNFVPFDMTANIHRGERIIPEADNRALMEAVRTQSRGPDSAAGAARVEAILLR
VEAVVVSVNEHARKLSDNLGRVTNDGSVMAVEVVNRLRLQQ
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgaaaaccaaaaattcggcttcactgttgctgctgagaacgaggcctcgcag
accttccagcagattggcaatgacgccgacaagatggccgccaaggtcaaccaagccggt
cagaaggccgctgagggcgtgggcgccattggcgacggtgctgagaatgccgcggaaaag
ctcacccgcgccgagagccgcatcgcttctgccatgcgcaaggccaccgaggaaacttta
caggccgctcaggctgccaagagcctctcgggcagcttcgagctcaagatggatatgcgg
ggcatggatgcctcgcgcctgcagccttacatcaaggctctgcgcgatgcagagagtgag
ctgtcggttttcaaggctgctgaggcggaggtgggccgccagaacgtatttgctgagaag
caccgccaagcacagcagcttgcgaagtcgtcagagtatgtgcgcttctggaatcaggag
ttggaccgcatggcggccgctgagaaacgtgcggccagtgagagcgcttttctcaactcg
ttacgcgagcagtcgagcgccatcggcaagacccgtgccgatcttcttgagttgcaggca
gcgcaactgggtgttgctacccaagcagcgccaatgattgcgaagctgcgtgaagctgag
agcggagtgggtaaggttggaatgagtgcggctgccatgagtgccgcgctgcgcaacgtg
cccgcccagttcaccgacattgtggtgagcttgcaggccggccaggcgccgttgactgtt
ttgctgcagcaaggcggccagttgaaggacatgttcggcggcgctggtgctgcagcaaag
gcattgggcggctatgtgttgggcctggtgaatcctttcactgtagctgccgctgctgct
gcgaccctgggccttgcgtactatcaaggtcaccaagagcagattgcctttgtgaaggcg
ctcaccctgtcgggcaatgcggcaggcgtgaccaccacacaactgacggaatatgcgcgc
cagattgacgccattgtgggtactcaagcgcaggcgactgcagcgctggtggccttcacg
caggctggtgtgaccggtgcggaccagctgcgaaagtatgcgcagaccgctatcgaatgg
gaaaaggccaccggccaggcagtgggtgacacggcaaagcaatttgcggacctgcagaaa
gacccattaagtgctgtcgtcaagctcaatgaggggatgaatttcctcacagctgatgtg
tacgagcagatcaaggccctcaacgatcaaggcaagtctgcccaggcctcagcggtggcg
atggatgcgctggacagcgttatgcgcgatcgcagcaagaccatcaaggaaagcctggga
tacctagagcgtgcgtggaacgccatcaagggcgctgctgctgacgcatgggatgcaatg
ctgaatgtgggccgccccaatacgatcaatgatcgactgggtgctgtgcgcaaggagctg
aactcgctgatcgatcagcagggctggggcgagactggggggggagctgcaaccggacgc
gtgactgcggagactaagcgccgcgtgcaggagcggatcgaggcactgcgcgcagaagag
tggcagcttgagaataatgccgcggctgagcagatgaacgccgcagcgcaagaggtatcc
gccaaagccacccaggcttcgatcaagtggcaggaaacgctcgaccagcatctgactaag
tcggaaaagctgactcgggctctggctgccgctcgggaggagtacaacaataagctgtca
ttcgtcccccaggatgacctcaagaagcgcagcgaattggcgcaacagctcgccaaggtc
gaggccagcctgcgcgaccagtacaaggagaaaggcccgagcaagactggcggcgtcagc
atgagcgacacccgtctgtctggtcttgaagctcagctagaggcggcccgccagtacggc
aagcagctgcaggagctgggtctcgcggcaaaggacctgaatgctggcgagcgcgagtcg
ctgaagatctccgccgagatggagaaggcgaccgatgcgaagaccgtcgccaagcttaaa
aacgccaaggcgactgcagacgagttgggcgcgcagctgcgaagcaatgagacctccgaa
gagtcgatgaaggccaaggatgctctgatcaagggcatgtacaaaagcgctgaggcgaca
gaggaggaagctgcgcgccttgaagcgtctttgagcgtctatggcaaggcccgaatagag
atcgagcgcatgacgttggctaagctgcagcagcagaaagccgacatgggcttgatcgcc
aatcctgagtacatggccgcgttggacaaacagattgcgggtcaacaggctgtgattgca
ggcctggagaagctggacttcaagaaattcagcgagaccatgggcaagtcgctggacgcc
gccaaagaagagttggcccttcaacaggagggaatttctcttttggggatggatgaagtg
gcccgccgcaagattctggccgttcgcaagatcgatctggaggttgccaagcagatcgct
gaggtggaaaagaccaaatacagcgacaacagcgatgacaacgagcgcgagaaggcggcg
cggcgcaagctgatctgggagaagtccgaggtggacacccagattgctatcggcaagata
caagaagagtatgcgctgcagaacgccgagaaatacaacgacatcttccgtcaaggtttt
gctgacttcgtgaacaacggcgcagatggcctcaaggcctttggcaagtcgctcaagacc
accatcttgacttctgcgtccgatgccctttaccaggcattcgcgcagaagttcgtgatg
aatgtcgccgcgaacgtcacgggtttgataggtgctggtgcaggcttccttgcaagcttg
tttggcggcggatctgaaggttctgccggcggcaatgttgggaacctcatcagcgctgga
tcgactggctacagcctgtactccggccaaggtcttgtgggacaggggtcgcgctacttg
gccaacttggtggggtggggcggcgaagctgcgcctgcagcgggttacgcagcaccagca
ggggccggctttgcagaaggtgcgggtggagcggcaattccagaggcctcctgggcttcc
agtgcttcccaatgggttgcatctggcggctgggtcatggctgtgccactgatcgcagcc
tatctgggtggtatgttcaaggaggaaaagcaggtcggtagcggcatcactggcgagctg
ggcggcgatctctacggttatcagttgatgcgcgaaagcggcagcctctttggtggccct
aagtaccgctaccttgtggcggagaaggagatcgaacagtccaaggctgagattgagcgc
cttaaaaaggagatcgctgacaaccctgatgacaagcgcaatgcctaccgtgagcggcaa
atccagcagcaatacagccgcttggagatgctctcgcagtacgacggcgccatcgaaggc
tctaagggacccatcaaggtcctgcaggatgcgttcctgggcatgcgcgaggacactgcc
tctcgggccgacagcctggggcttgacggcgatgcgatccgcgcgatgcgcgtgaccctg
ggcctggatgaaatccacccggacacgggcggcaaaggacttgagctgacaggactcacg
caagaggaggcgtcggccaaggtccagcaggcgttggcgcaagccaatgaggagttggcc
cgctcggtgctcggccactgggaagagcagacccgtgaagtcacccgcacggtgtgggac
aacgtggagctgcccactgacggcgacacccagcagtatggccgcataggtcgagaagtg
acggagacgatcactgagcaggtattcgtgatgagcgaatacgtgcgaacgggtgagacg
gcagtgcaggcgctcacccgactgtctgactctctgtatagcgtgaattcggtctttgac
atgcttgggcttacgctcatggatacgtcgctggctggcgctgacatggcttcggacatc
attgacgcattcggcggcgctgataagttctcggctgcgaccggcaactattacgacaag
ttctacaccgaccaagagaaggtgaagaaccagacgcgactgctaaacgaccagctcaaa
aagctgggcatcgagaccatgccggccagccgtgaggcgttcaaggaatacatcaacggg
atcgacaaaagcacggaagagggccaaaagctctttgccagcttgctgggtctcgtggat
gtgttcgacatgatctacacgtcggccgagaacatcgcctcgctcaagggcgatctgcag
attcaactgctgcgcgcgaagggtaacgatgcggaggcaacccgcctggagcgcgccaag
cagatcaaggagctggagaagttcaacgatccagagctggtgaaactgcaggttgagatc
tgggacaccgaggacaaggccaaggccgatgaggccgccaagacgctggcccagcagaac
ctgcaggccgccatctcccgtgaaaaggagtactggaaccagtttgcagcggacgcaaag
gaagccttcacaaaggcgtccagctatgtggacctgttcaagggcagcgccaagtctctg
cgtgcgagcgtggacgacatggcgaactcgcaggcggcggctggcatggtgtacatcgag
caggcgcttgagaacgctcgccgaggtctagggtttggtgactacgaccagacgcaaagc
gcgatcaacgcggccacgggcggcctcgtcatggacaactacgccacccaggcggagctt
gactatgacaagaaggtgcttgcgggccagttggacgagctgggcgagttcgcagagttg
gccaagaccgatgcgcaaaagcaaatcgacctggccacttcgcagctcaagcgcttggat
gatatccagaccttctggcagacctttggtgaagaccaggtggacgcgacactaagcgtt
accgacgccgtcaacgcgctctacaagctgctggatcccaaggagcaggagcggatcaag
aaggaagaggcagccaaggctggcttggatggcggcggggcaaaaccaaccaccacaccg
actggcggcggaagtctcggcggatcggtcaccggctccaatcgggtcacggtagtgggc
ttgactgctgacgggcgggccatcttcagcaatggagagatcggccagaccccagcaggg
cagaccacctacaacagcaccggccagatgaacagcaatggctactcccttgcggagttt
gagcggttcaagaccagcggcgagtttgagtgggatgcaaagctgggccagtggcgcaag
cgcgcatctttcgcggtgggcacgaacttcgtgcctttcgacatgacagcgaacatccac
cgaggcgaacggatcatcccagaagcggataaccgtgcgctgatggaggcggttcgcact
cagtctcgcggcccggactcggcagctggcgcggcgcgtgtggaggcaatcctgttgcgc
gtcgaggctgtcgtggtgtcggtcaatgagcatgcccgcaagctgtccgacaacctgggc
cgtgtgaccaatgacgggtcggtcatggccgttgaggttgtgaatcggcttcgccttcaa
cagtag
DBGET
integrated database retrieval system
