Comamonas squillarum: N4T19_00225
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Entry
N4T19_00225 CDS
T10846
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
csqu Comamonas squillarum
Pathway
csqu00020
Citrate cycle (TCA cycle)
csqu00190
Oxidative phosphorylation
csqu00650
Butanoate metabolism
csqu00720
Other carbon fixation pathways
csqu01100
Metabolic pathways
csqu01110
Biosynthesis of secondary metabolites
csqu01120
Microbial metabolism in diverse environments
csqu01200
Carbon metabolism
Module
csqu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
csqu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
csqu_M00149
Succinate dehydrogenase, prokaryotes
csqu_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
N4T19_00225 (sdhA)
00650 Butanoate metabolism
N4T19_00225 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
N4T19_00225 (sdhA)
00720 Other carbon fixation pathways
N4T19_00225 (sdhA)
Enzymes [BR:
csqu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
N4T19_00225 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
Pyr_redox_3
Lycopene_cycl
NAD_binding_8
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UXC18606
UniProt:
A0ABY5ZYQ5
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All DBs
Position
complement(45524..47329)
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AA seq
601 aa
AA seq
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MSYTKENITKRKFDVVIIGAGGSGLRAALELSKAGLSVAALSKVFPTRSHTVAAQGGVSA
SLGNMSPDNWEWHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANHGEKPVQRACAAADRTGHAMLHTLYQQNVKSKTNFFVEWMALDLIRDESG
DVIGVTAIELETGDLYELHAKAVLLATGGAGRIFQASTNAFINTGDGLGMAARAGIPLQD
MEFWQFHPTGVAGAGVLLTEGCRGEGAILRNSDGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNKDYILLDMTHLGADTIRKRLPSVEEIGHNFANVDITKEPIPVVPTIHYQ
MGGIPTNINGQVVVWDGQENKVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGKSAGK
HIVNYVNGYGEFKPMPENASDFSLSRLNKLDESTSGEYAQDVANDIRACMQLHAGVFRTQ
KSMDEGVKKIADIRARVGGVTLKDKSKVWNTARMEALEVANLIEVAQATMVSAAARKECR
GAHTVDDYEHPADDPKYPLGRNDIDWLKHTLWYSAANSLEYKPVQLKPLTVPSVPPKVRT
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagctatacaaaagagaacatcaccaagcgcaagtttgatgtcgtcatcatcggcgca
ggcggctccggtctgcgcgctgcgctggaactgtccaaggctggcctgtccgtggctgcc
ttgtccaaggttttccccacccgctcgcacaccgtggcagcgcaaggtggcgtgtccgcc
tcgctgggcaacatgtcgcccgacaactgggaatggcacttctacgacaccatcaagggc
tcggactggctcggtgaccaggatgcgatcgagttcatgtgccgcgaagcacccaaggtg
gtgtacgagctggaacacttcggcatgcctttcgaccgcaaccccgatggcacgatctac
cagcgccccttcggcggccacaccgccaaccatggcgaaaagcccgtgcaacgcgcttgc
gcagcggctgaccgtaccggccacgcgatgctgcacacgctctaccagcaaaacgtcaag
tccaagaccaacttcttcgtcgagtggatggcgctggacctgatccgcgacgaatccggt
gacgtgatcggcgtgaccgccatcgagctggaaaccggcgacctgtacgagctgcacgcc
aaggcggttctgctggccaccggcggcgcaggccgtatcttccaggcatcgaccaatgcc
ttcatcaacaccggcgacggcctgggcatggctgcacgcgcaggcatcccgctgcaggac
atggagttctggcagttccaccccaccggcgtggccggcgcgggcgtgctgctgaccgaa
ggctgccgcggtgaaggcgctattctgcgcaacagcgatggcgagcgtttcatggagcgc
tatgcgccaaccctgaaggatctggcgccacgcgacttcgtctcgcgctcaatggaccag
gaaatcaaggaaggccgtggctgcggtccgaacaaggactacatcctgctggacatgacc
cacctgggtgcagataccatccgcaagcgcctgccttcggtggaagagatcggccacaac
ttcgccaacgtggacatcaccaaggaaccgattcctgtggtgcccaccatccactaccag
atgggcggtattcccaccaacatcaacggccaggtcgttgtctgggatggtcaagaaaac
aaagtggtcaacggtctctacgctgtgggcgaatgctcctgcgtgtcggtgcacggcgcc
aaccgcctgggcacgaactcgctgctggacctgctggtctttggcaagtcggccggcaag
cacatcgtcaactacgtcaatggctatggcgaattcaagccgatgcctgagaacgcatcg
gacttctcgctgtcgcgcctcaacaagctcgacgagtcgaccagcggcgaatacgcgcag
gacgtggccaacgacatccgcgcctgcatgcagctgcacgccggtgtgttccgcacgcaa
aagagcatggacgaaggcgtcaagaagattgccgacatccgcgcccgcgtcggtggcgtc
accttgaaggacaagtccaaggtctggaacaccgctcgcatggaagcgctggaagtggcc
aacctgatcgaagtggcgcaagccaccatggtctcggccgccgcccgcaaggaatgccgt
ggcgcccacaccgtggatgactacgagcaccctgccgatgaccccaagtacccactgggc
cgcaatgatatcgactggctcaagcacaccctgtggtacagcgctgccaacagcctggag
tacaagccagtgcaactcaagccgctgaccgtgccgtcggtaccgcccaaggtccgtacc
ttctaa
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