Comamonas squillarum: N4T19_01630
Help
Entry
N4T19_01630 CDS
T10846
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csqu Comamonas squillarum
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csqu03032
]
N4T19_01630
03400 DNA repair and recombination proteins [BR:
csqu03400
]
N4T19_01630
Enzymes [BR:
csqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N4T19_01630
DNA replication proteins [BR:
csqu03032
]
Prokaryotic type
DNA Topoisomerases
N4T19_01630
DNA repair and recombination proteins [BR:
csqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N4T19_01630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UXC18861
LinkDB
All DBs
Position
complement(358678..359700)
Genome browser
AA seq
340 aa
AA seq
DB search
MVKPQKPLAYVTDASPGWQRIQRGDGFVYQNQRGQTIRNPRQLERIRLLVIPPAYTDVWI
CPDPQGHLQATGRDARGRKQYRYHPLWQEQRKQTKFERMAAFAAKLGLIRRRIQRDLKAG
DTTQTSVAAAVVRLLDTTALRIGNDSYARENGSFGLTTLRNRHVTMRASRIRLAFKGKSG
VEQQVELEDPRVARIVRRCQDLPGQRLFQYVDDAGERKQLRSEHVNAYLHEIAGEDFSAK
DFRTWHASVLALSLALQSRSSDAPLTAPDIVRQVAQHLGNTVAVCRKYYIHPLVMEVCEG
PEGSARCDAYAGKLRGSAGLREAERTLMAFLATGKRRRKP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaccccaaaagcctttggcttatgtcaccgatgcctcgcccggctggcagcgc
atccagcgcggcgacgggtttgtctaccaaaaccagcgcgggcagaccatccgcaacccg
cgccagctcgagcgcatacgcctcttggtcattccccccgcctacaccgatgtgtggatc
tgccccgatccgcagggccacctgcaggcgacgggccgcgatgcccgggggcgcaagcag
taccgctaccacccgctgtggcaggagcagcgcaagcagaccaagttcgagcgcatggcg
gcctttgcggccaagctgggtctgattcgaaggcgcatccagcgcgacctgaaagcgggg
gataccacgcagacctcggtggcggcagcggtagtccgccttctggacaccacggcgctg
cgcattggcaacgacagctatgcgcgcgagaacggctcgtttgggctgacgaccctgcgc
aaccgccatgtgacgatgcgcgcatcgcgcatccggctggcgttcaaaggcaagagcggc
gtggagcagcaggtggagctggaggacccgcgcgtcgcgcgcatcgtgcggcgctgccag
gacctgccgggccagcggttgttccagtatgtggatgacgcgggcgagcgcaagcagctg
cgctccgagcatgtgaatgcctatctgcacgagatcgccggtgaggacttcagcgccaag
gactttcgcacctggcatgccagcgtgctggccctgtcgctggcgctgcagtcgcgcagc
agcgatgcgccgctgacggcacccgatatcgtccgccaggtcgcccagcacctgggcaat
accgtagcggtctgccgcaagtactacattcaccccctggtgatggaggtctgcgaaggg
cccgagggcagcgcgcgctgcgatgcctatgcgggcaagctgcgcggcagcgcgggattg
cgcgaggccgagcgcacgctgatggcgtttttggcgactggcaagcggcggcgcaaacca
taa
DBGET
integrated database retrieval system
