Comamonas squillarum: N4T19_03675
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Entry
N4T19_03675 CDS
T10846
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
csqu Comamonas squillarum
Pathway
csqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N4T19_03675 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csqu03400
]
N4T19_03675 (recB)
Enzymes [BR:
csqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
N4T19_03675 (recB)
DNA repair and recombination proteins [BR:
csqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N4T19_03675 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
His_Phos_1
AAA_30
AAA_11
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UXC19238
UniProt:
A0ABY5ZZ09
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All DBs
Position
775726..779571
Genome browser
AA seq
1281 aa
AA seq
DB search
MSAMPSDTTLPLEPLRFPLWGSRLIEASAGTGKTYTIAALYLRLVLQHGGEQAFGRPLAP
PDILVVTFTDAATQELRDRIRQRLSEAAQLFAQNPQEPDSEAAVDPLLLALRADYPASRW
PACARLLHEAANWMDEAAVSTIHSWCYRMLREHAFDSGSLFQQSLITDQSELLTQVVQDY
WRRQFYDLPASSLRSLLQVVATPQALQEAIQPMLSRQDADWRYDGAALAPADQVDLAALL
AQASEAAARHTALENSARLLWQQHRAELEQLLIALLPGLNGTTYPKKDEPGVFEAWLAAM
AAWSDGEPAPAKIRAFSQSGIKAKKGVTVPAHAAFAAIDAWLEAVVQDAESATPLKPLLL
RHAIAHVQRALEAEKQRRAELGFDDLLQRLDSALHAPGGEALAQRIRSQFPVAMIDEFQD
TDPLQYRIFECIYRIADNDPAQGLFMIGDPKQAIYAFRGADIYTYLRARAATQGRHYSLG
TNYRSTQAVVQAINHCFVHAEGHPRAAFRFRQDAQHNPLPFVAVDANGRRDALFLQGEAT
PAMTLWTLDAGTPALADAADEQGDAAATGKSARTGVAESAYRQRMAQSAASQITTWLNAA
RAGQAGFGPSADALARPLRPADIAILVRGRAEAELVRNALKDRGLASIYLSDRDSVFQTA
EAADMLRWLRAVNAPGHDGLLRVALATASMDWSWQDLERLNHDEQHWEQLALRTRVLQQL
WQKKGVLPMLRQWLLDFDLPARWLAQPGGERRLTNVLHLAEWLQRASTEVEGAQALIRRL
AEQMDSPEGEEEILRLESDADLIKVVTIHKSKGLEYPLVLLPFISSWRDFDGKSRGYAQY
HDAASGGLVVELNNKHQDAVSANNDERLSEDMRLLYVALTRAQYALWLGVAPLAKGMSRA
GSLEKSAVGYLLAGGQKLPDLELHAYLQDFASGCPQMAVQPVPEVSLQRYQPERPPAAFA
ARQTRRQADEHWWIASFSALTERLGYAAPSPSLWIEDALTAAEPETAQQDQYLEPQEPAP
DAATPGQPQPGSLHAFPKGPDAGNFLHGLLEWCAQEGFATVLSRPAALDGIIAYRCQVRG
WADWAEPLQGFVRQWLQTPLRLQGAPTDRQVDTPVDSPVALQSLGDYQVEMEFWLSIHRA
STGQLDALVQQHVLPGHPRPALLANQLHGMLKGYMDLVFEQGGRYYVMDYKSNWLGADSA
AYTAEAMAAAVLQHRYDLQYVLYTYALHRLLQQRLPGYDYERDVGGVQYWFLRGVGADHQ
GLYHDKPPRALMDALDALFAQ
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgatgccaagcgataccactctgccactcgagccgctgcgctttccgctgtgg
ggcagtcgcttgatcgaggccagtgccggcaccggaaaaacctatacgatcgccgcgctc
tacctgcgtctggtgctgcagcatggcggcgagcaggcctttggccggccgctggcgccg
cccgatattctggtggtgaccttcaccgatgcggcgacgcaagagctgcgcgaccgcatt
cgccagcgcctgtcagaagccgcccagctgtttgcgcagaacccgcaagagccggatagc
gaagcggcagtggaccccttgctgctggcgctgcgcgccgactaccccgccagccgctgg
cccgcctgcgcccgtttgctgcacgaggccgcgaactggatggacgaggcggcggtctcc
accatccacagctggtgctaccgcatgctgcgtgagcatgcgtttgacagcggcagcctg
ttccagcagagcctcatcaccgaccagagcgagctcctgacccaggtggtgcaggactac
tggcgccgccagttctatgatctgcccgccagctcactgcgcagcttgctccaggtggtg
gccacgccgcaggccttgcaagaggccatccagcccatgctcagccgccaggatgccgac
tggcgctacgacggcgcggcactggcgcctgccgaccaggtcgatctggccgcattgctg
gcccaggccagcgaggcagccgcacgccacaccgcgctggagaacagcgcacgcctgctg
tggcagcagcaccgggccgagctggagcagctgctcatcgcgctgctgccgggtctcaac
ggcacgacctatcccaaaaaggacgagccgggcgtgttcgaggcctggctcgccgccatg
gcggcctggagcgatggcgagccggcccccgccaagattcgagccttcagccaatcgggt
atcaaggccaaaaaaggcgtgaccgtgcccgcgcatgcggcctttgccgccatcgatgcc
tggctggaggccgtagtgcaagacgcagagtccgccacgccactcaaaccgctgctgctg
cgccatgcgattgcccatgtgcagcgcgcgctggaggcggaaaagcagcgccgcgccgag
ctgggctttgacgacctgctgcagcgcctcgatagcgccttgcatgcgcctggcggtgag
gcgctggcgcagcgcatccgcagccagtttccggtggcgatgatcgacgagttccaggat
acggacccgctgcagtaccgcatttttgagtgcatctaccgcatcgctgacaacgacccc
gcgcagggcctgttcatgattggcgaccccaagcaggccatttacgcgtttcgcggtgcc
gatatctacacctacctgcgcgcccgcgctgccacccaagggcgccattactcgctgggc
accaactaccgctccacccaggcggtggtgcaggccatcaaccactgctttgtgcatgcc
gagggccatccccgcgcggcctttcgcttccggcaggacgcgcagcacaatcccctgccc
tttgtggccgtcgatgcaaacggccggcgtgacgcactctttttgcagggcgaggctacg
ccggcgatgaccttgtggaccctggatgccggcacgccagcgctggccgatgccgccgac
gagcagggcgatgccgcagccactggcaagagcgcgcgcaccggcgtggccgaatcggcc
taccgccagcgcatggcgcagtcggcagccagccagatcaccacctggctcaatgccgcc
cgggcgggccaagccggttttggcccatctgcggatgcgctggcccggccgctgcgccca
gccgatatcgccatcctggtgcggggccgcgccgaggcagagctggtgcgcaatgcgctc
aaggaccgggggctggccagtatctacctgtcggaccgcgactcggtgttccagaccgct
gaggccgccgacatgctgcgctggctgcgcgccgtcaatgcgccgggccatgacggcctg
ctgcgcgtggcgctggccaccgcgtcgatggactggtcctggcaggacctggagcggctc
aaccacgatgagcagcattgggagcaactggcgctgcgcacccgcgtgttgcagcagctg
tggcagaaaaagggtgtgttgccgatgctgcgccagtggctgctcgattttgacctgccc
gcgcgctggctggcccagccgggcggcgagcggcgcctgaccaatgtgctgcacttggcc
gaatggctgcagcgcgcatcgaccgaggtggagggcgcgcaggcgctgatccgccgcctg
gccgagcagatggacagccccgagggcgaggaagaaatcctgcgcctggaaagcgatgcc
gatctgatcaaggtggtcaccatccacaagtccaaggggctggagtacccgctggtgctg
ctgcccttcatcagcagctggcgcgattttgatggcaagagccggggctatgcgcagtac
cacgatgccgcatcgggcggcctggtggtggagctgaacaacaagcaccaggacgccgtc
agcgccaataacgacgagcgcctgagcgaagacatgcgcctgctctatgtggcgctgacc
cgcgcccagtacgcactgtggctgggcgtggcgccgctggccaagggcatgagccgcgcg
ggcagcctggagaaaagcgccgtcggctacctgctggccggcgggcaaaaattgcctgac
ctagaactgcatgcctatctgcaggactttgccagcggctgtccgcagatggccgtgcag
ccggtgcccgaggtcagcctgcagcgctaccaacctgagcgcccgcccgccgcctttgcg
gcgcgccaaacgcgccggcaggccgatgagcactggtggatcgccagcttctcggcgctg
accgagcggctgggctatgccgccccttcgccgagcctctggatcgaagacgcgctgaca
gccgctgaacccgaaacggcgcagcaggaccagtacctggagccgcaagagccggcaccc
gatgcggccacgcccggccagccgcagcccggtagcctgcatgcgtttcccaaggggccg
gatgccggcaactttctgcacggcctgctggaatggtgcgcgcaagagggttttgccacg
gtgctcagcaggcctgcagcattggatggcatcatcgcctaccgctgccaggtacgcggc
tgggccgattgggccgagccgctgcaaggctttgtgcggcaatggctacaaacgccgctg
cggctgcagggcgcgcccaccgacaggcaggtcgacacgccggtcgacagcccggtcgca
ctgcaatcgctgggcgactaccaggtcgagatggagttctggctgtcgatccaccgggcc
tcgaccggccagctcgatgcgctggtgcagcagcatgtgctgcccggccatccccggccc
gcgctgctggccaaccagctgcacggcatgctcaagggctatatggacctggtgttcgag
cagggcggccgctactatgtgatggactacaaatccaactggctcggtgcggacagtgcg
gcctacacggcagaagccatggccgctgccgtgctgcagcaccgctatgacctgcagtat
gttctgtacacctacgcgctgcaccgcctgctgcagcagcgcctgcccggctatgactac
gagcgcgatgtgggcggcgtgcagtattggtttttgcggggcgtcggtgcggaccaccag
ggcctctaccatgacaagcccccgcgtgcactgatggatgcgctcgatgcgctatttgcg
caatga
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