Comamonas squillarum: N4T19_03890
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Entry
N4T19_03890 CDS
T10846
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
csqu Comamonas squillarum
Pathway
csqu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N4T19_03890 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csqu01007
]
N4T19_03890 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csqu03016
]
N4T19_03890 (alaS)
Enzymes [BR:
csqu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
N4T19_03890 (alaS)
Amino acid related enzymes [BR:
csqu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
N4T19_03890 (alaS)
Transfer RNA biogenesis [BR:
csqu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
N4T19_03890 (alaS)
Prokaryotic type
N4T19_03890 (alaS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
ZapB
Prefoldin_2
Motif
Other DBs
NCBI-ProteinID:
UXC19277
LinkDB
All DBs
Position
829731..832355
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AA seq
874 aa
AA seq
DB search
MSTPTFSVAEIRKTFLDFFASKGHTIVPSSPLVPGNDPTLMFTNSGMVQFKDVFLGTDKR
PYTRATSVQTCLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTE
VYKLPAEKLLATVYEEDDEAYDIWTKEIGLPPERVIRIGDNKGGRYKSDNFWMMADTGPC
GPCSEIFYDHGPHIAGGPPGSPDEDGDRFIEIWNNVFMQFDMAEDGSVKPLPAPCVDTGM
GLERLAAILQHVHSNYEIDLFQALIKAAARETHIDDLETPSLKVIADHIRATAFLVADGV
IPSNEGRGYVQRRIIRRAIRHGYKLGQKTPFFHKLVKDLVAVMGDAYPKIREQDARITEV
LKVEEERFFETLAHGMDILDSALAGGAKVLPGDVAFKLHDTYGFPLDLSNDVARERGLSV
DEAGFHAAMEQQKSQARAAGKFKMDRALEYTGAANAFTGYTQLSEAAKVVALYVDGSSVN
AINAGQTAVVVLDTTPFYAESGGQVGDQGVISAGANRFVVEDTLKIKADVFGHHGQLAAG
SLKVGDAVQAEVDTALRAATMRNHSVTHIMHKALREVLGDHVQQKGSLVNAERTRFDFAH
NSPVTDAQKREIEKRVNAEILANTETGARVMDIESAQKTGAMMLFGEKYGETVRVLDIGS
SRELCGGTHVQRTGDIGLFKVVAEGGVAAGVRRIEAVTGENALAYLQSLESTVDEAAATL
KAPVAELNHRIGGALDQIKALEKELAQLKGKLASSQGDELVGQAVDVKGIKVLAATLDGA
DAKALRDTMDKLKDKLGTAAIVLAAIDGDKVQLAAGVTKDSIGKVKAGELVNFVAQQVGG
KGGGKPDMAMAGGTNPAGLAQALAGVQAWVAERV
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacccactttttccgtcgctgagatccgcaagaccttcttggactttttcgcg
tccaaggggcacaccattgttccgtccagcccgctggtgccgggcaacgatccgacgctg
atgttcaccaactccggcatggtgcagttcaaggatgtgtttctgggcacggacaagcgc
ccctacacccgggcaacgagcgtgcagacctgcctgcgtgccggtggcaagcacaacgac
ctggaaaacgtgggctataccgcgcgccaccacaccttcttcgagatgctgggcaactgg
tcctttggcgactacttcaagcgcgaatcgctcaagtgggcctgggagctgctgaccgag
gtctacaagctgccggccgagaagctgctggccaccgtctatgaagaagacgacgaggcc
tacgacatctggaccaaggagatcggcctgcccccagagcgcgtgatccgcattggcgac
aacaagggcggccgctacaagagcgacaacttctggatgatggccgacaccggcccttgc
ggcccttgctctgaaatcttctacgaccacggcccgcacattgccggcggccctccaggc
tcgcccgatgaagacggtgaccgtttcatcgagatctggaacaacgtgttcatgcagttc
gacatggccgaagacggctcggtcaagccgctgccagccccctgcgtcgataccggcatg
ggcctggaacgcctggctgccatcttgcagcatgtgcacagcaactacgagatcgacctg
ttccaggcgctgatcaaggccgctgcacgcgagacccatatcgacgatctggaaacccca
tcgctcaaggtcatcgccgaccacatccgcgcgaccgccttcctggtggccgatggcgtg
atcccgtcgaacgaaggccgcggctatgtgcagcgccgcatcatccgccgcgccatccgc
cacggctacaagctgggccagaagacccccttcttccacaagctggtcaaggacctggtc
gccgtgatgggcgatgcctaccccaagattcgcgagcaggatgcgcgcatcaccgaggtg
ctcaaggtcgaggaagagcgcttcttcgagaccctggcccatggcatggacatcctggac
agtgcgctggccggtggcgccaaggtgctgcccggtgatgtggccttcaagctgcacgac
acctacggctttccgctggacctgtccaacgacgtggcgcgcgaacgcggcctgagcgtg
gatgaggcgggcttccatgccgcgatggagcagcaaaagagccaggcccgcgcggccggc
aagttcaagatggaccgcgcactggaatacaccggcgcggccaatgccttcaccggttac
acgcagctgagcgaggccgccaaggtcgtggcgttgtatgtcgatggcagcagcgtcaac
gcgatcaacgctggccagacggccgtggtcgtgctggacaccaccccgttctacgccgag
tcgggtggccaggtgggcgaccagggcgtgatttcggccggtgccaaccgctttgtcgtg
gaagacaccttgaagatcaaggccgatgtgtttggccaccacggccagctcgctgcgggc
agcctcaaggtgggcgatgcagtgcaagccgaggtcgataccgccttgcgcgccgccacc
atgcgtaaccactcggtcacccacatcatgcacaaggcgctgcgtgaagtgctgggcgac
catgtgcagcaaaagggcagcctggtcaatgcggaacgcacccgctttgactttgcccac
aacagcccggtgaccgatgcgcaaaagcgcgagatcgaaaagcgcgtgaatgccgagatc
ctggcgaacaccgaaaccggcgcgcgcgtgatggacatcgagagcgcacaaaagaccggc
gcgatgatgctgtttggtgaaaagtacggcgagaccgtgcgcgtgctggacattggatcg
agccgggaactctgcggcggcacccatgtgcagcgcaccggtgacattggcctgttcaag
gtcgtcgccgaaggcggcgtggccgctggcgtgcgccgtatcgaagcggtgaccggcgag
aacgcgctggcctacctgcagtcgctcgaatcgaccgtggacgaagccgctgccaccttg
aaggccccagtggctgagctgaaccaccgcatcggtggtgcgctcgaccagatcaaggcg
ctggagaaggaactggcccagctcaagggcaagctggcgtcgagccagggcgatgagctg
gtcggccaggccgtggacgtcaagggcatcaaggtgctggctgccaccctggatggcgcc
gatgcgaaagcgctgcgcgacaccatggacaagctcaaggacaagctgggcaccgctgcc
atcgtgttggcggctatcgacggcgacaaggtacagctggccgcaggcgtgaccaaggac
agtattggcaaggtcaaggccggtgaactggtgaactttgtcgcccagcaagtgggcggc
aagggcggcggcaagcccgacatggcgatggctggcggcaccaacccagcgggcctggcg
caagccctggcgggcgttcaggcctgggtggccgagcgggtctga
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