KEGG   Comamonas squillarum: N4T19_04585
Entry
N4T19_04585       CDS       T10846                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
csqu  Comamonas squillarum
Pathway
csqu00010  Glycolysis / Gluconeogenesis
csqu00020  Citrate cycle (TCA cycle)
csqu00260  Glycine, serine and threonine metabolism
csqu00280  Valine, leucine and isoleucine degradation
csqu00310  Lysine degradation
csqu00380  Tryptophan metabolism
csqu00620  Pyruvate metabolism
csqu00630  Glyoxylate and dicarboxylate metabolism
csqu00640  Propanoate metabolism
csqu00670  One carbon pool by folate
csqu00785  Lipoic acid metabolism
csqu01100  Metabolic pathways
csqu01110  Biosynthesis of secondary metabolites
csqu01120  Microbial metabolism in diverse environments
csqu01200  Carbon metabolism
csqu01210  2-Oxocarboxylic acid metabolism
csqu01240  Biosynthesis of cofactors
Module
csqu_M00009  Citrate cycle (TCA cycle, Krebs cycle)
csqu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
csqu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
csqu_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:csqu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    N4T19_04585 (lpdA)
   00020 Citrate cycle (TCA cycle)
    N4T19_04585 (lpdA)
   00620 Pyruvate metabolism
    N4T19_04585 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    N4T19_04585 (lpdA)
   00640 Propanoate metabolism
    N4T19_04585 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    N4T19_04585 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    N4T19_04585 (lpdA)
   00310 Lysine degradation
    N4T19_04585 (lpdA)
   00380 Tryptophan metabolism
    N4T19_04585 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    N4T19_04585 (lpdA)
   00670 One carbon pool by folate
    N4T19_04585 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csqu04147]
    N4T19_04585 (lpdA)
Enzymes [BR:csqu01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     N4T19_04585 (lpdA)
Exosome [BR:csqu04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   N4T19_04585 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA FAD_binding_2 BSH_YknX AlaDh_PNT_C Thi4 Pyr_redox_3 BSH_Fcp1 BSH_CusB NAD_binding_8 HI0933_like DEC-1_N DAO FAD_binding_3 BSH_RND GCV_H Lycopene_cycl RnfC_N
Other DBs
NCBI-ProteinID: UXC19403
UniProt: A0ABY5ZZI2
LinkDB
Position
complement(974921..976786)
AA seq 621 aa
MAIVDIKVPDIGDFAEVGVIELLVQPGDTVAKDQSLITVESDKASMEIPSSHAGVVKELK
IKIGDKVAEGSVILSLEAAEGAAAAPAPAAAPAASSPAPAPAAAAPAPAAQSAPAAALSP
VASNYSGQVDEDCDVVVLGGGPGGYSAAFRAADLGLKVVLVERYKTLGGVCLNVGCIPSK
ALLHVAAVMDEVKHLDVAGIKFAAPEVNIDQLRAHKDKVIGKLTGGLGQMAKMRKVTIVR
GYGNFVSANHIEVQETSGDGQEQTGAKKVVQFKKAIIAAGSQAVHLPFMPKDERVVDSTG
ALDLKAVPKRMLILGGGIIGLEMGTVYSTLGARLDVVEMMDGLMQGADRDLVKVWQKMNA
PRFDNIMVNTKTVAAEATPEGIKVSFEPAKEGVTVPEPQVYDLVLQAVGRTPNGKKIGAE
AAGVSVTDRGFINVDIQMRTNVPNIFAIGDIVGQPMLAHKAVHEAHVAAEVIAGELQGNK
ELAAAAFNARVIPSVAYTDPEVAWVGLTEDQAKAQGIKVKKGLFPWAASGRAIANGRDEG
FTKLLFDDSPEAHGHGKILGGGMVGTHAGDMIGEIALAIEMGADTVDIGKTIHPHPTLGE
SIGMAAEVAHGTCTDVPPARK
NT seq 1866 nt   +upstreamnt  +downstreamnt
atggcaatcgtagatatcaaagtccccgacattggtgatttcgctgaagtgggcgtgatc
gagctgctggtgcagcctggcgacaccgtcgccaaggaccagtcgctgatcaccgtcgag
tcggacaaggcctcgatggagatcccgtcgagccatgccggcgtggtcaaggagctcaag
atcaagatcggtgacaaggtcgctgaaggctcagtgatcctatcgctggaagccgcagaa
ggcgcagctgctgcccccgcacctgctgctgcacctgcagcctcgtcgcccgctccggcc
cctgcagcagcggcgcctgctcccgcagcgcagtccgcaccagctgcagcgctgtccccg
gtggccagcaactacagcggccaggtcgatgaagactgtgacgtggtcgtgctcggtggc
gggccaggcggctactcggccgccttccgcgccgctgacctgggcctcaaggtggtgctg
gtcgagcgctacaagacgctgggcggtgtctgcctgaacgtgggttgcatcccctcaaag
gctttgctgcatgtggctgccgtgatggacgaggtcaagcacctggacgtggccggtatc
aagttcgccgcgcccgaggtcaatatcgaccagctgcgcgcccacaaggataaggtcatc
ggcaagctgaccggcggtctgggccaaatggccaagatgcgcaaggtcacgatcgtgcgc
ggctatggcaatttcgtcagcgccaaccacatcgaagtgcaggaaacctcgggcgatggc
caggagcagaccggcgccaagaaggtcgtgcagttcaagaaggccatcattgctgcaggc
tcgcaagccgtgcatctgcccttcatgcccaaggacgagcgcgtggtcgattccacgggt
gcgctggacctgaaggccgtgcccaagcgcatgctgatcctgggcggcggcatcatcggc
ctggaaatgggcaccgtctacagcacgctgggcgcacgcctggatgtggtcgagatgatg
gatggcctgatgcaaggcgctgaccgcgatctggtcaaggtctggcagaagatgaacgcg
ccgcgctttgacaacatcatggtcaacaccaagaccgtggccgccgaagcaacgcccgaa
ggcatcaaggtctcgttcgagccagccaaggagggcgtcaccgtgcccgaaccccaggtg
tacgacctggtgctgcaagccgtgggccgcacgcccaatggcaagaagatcggcgcagag
gctgcaggcgtgtccgtgacggaccgtggctttatcaatgtcgacatccagatgcgcacc
aatgtgcccaacatcttcgcgatcggcgacatcgtgggccagccaatgctggcacacaag
gctgtgcacgaagcgcatgtggccgccgaagtcatcgccggtgagctgcaaggcaacaag
gagctggccgctgccgctttcaatgcccgcgtgattccatcggtggcctataccgatcct
gaagtggcatgggtgggtctgaccgaagaccaggccaaggcccaaggcatcaaggtcaag
aagggcctgttcccctgggctgcctcgggccgcgccattgccaatggccgcgacgaaggc
tttaccaagctgctgttcgacgactcgcccgaagcccatggtcacggcaagatcctgggc
ggcggcatggttggcacgcacgccggcgacatgatcggcgagatagcactggccatcgag
atgggtgcagacactgtggacatcggcaagaccatccacccgcacccgaccttgggcgag
agcattgggatggcggccgaagtggcccatggcacctgcaccgatgtgccgccagcgcgc
aagtaa

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