Comamonas squillarum: N4T19_06205
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Entry
N4T19_06205 CDS
T10846
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csqu Comamonas squillarum
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csqu03016
]
N4T19_06205 (truB)
Enzymes [BR:
csqu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
N4T19_06205 (truB)
Transfer RNA biogenesis [BR:
csqu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N4T19_06205 (truB)
Prokaryotic type
N4T19_06205 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF6911
Motif
Other DBs
NCBI-ProteinID:
UXC19705
LinkDB
All DBs
Position
complement(1339531..1340523)
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AA seq
330 aa
AA seq
DB search
MHASRTRVQRRPVHGVFLLDKPIGLSSNDALQKVKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLQLDAPKTYEALVHLGATTTTGDAEGEVLQTWEVDGEALTPETLDAVAARF
TGPISQVPPMYSALKRDGKALYEYARAGITLEREPRAVTILHLTLSRVQEEQDFVALKMT
VRCSKGTYVRTLAEDIGQALGYGAHLRSLRRIETGGIDLSRCISLQTLEATPDAERLHTV
LPVDTLLAAHTRVTLDGDNAGRFLSGLRRRGEWADADAVAVYGEEPPALLGVAHIRAREL
IPDRLLSPVEIQQILEGTPRPQASGILETS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcctctcgcacacgggtgcagcggcgccctgtgcacggggtgtttctgctcgat
aaacccattggcttgtccagcaacgacgctttgcaaaaagtgaagtggctgctgcgcgcc
gaaaaagcgggccataccggcacgctagacccattggctacgggtgtgctgccgctgtgt
tttggcgcggccaccaagttcagccaattgcagctcgatgcccccaagacctatgaggcc
ttggtgcacctgggtgctaccaccaccaccggcgacgccgagggcgaggtgctgcagacc
tgggaggtggatggggaggcgctgacgcccgagaccctggacgccgtggcagcccggttt
accggccccatcagccaggtgccacccatgtacagcgcgctcaagcgcgatggcaaggca
ctctacgaatacgcccgcgccggcatcacgctcgagcgtgagccgcgtgctgtcaccatc
ttgcatctgacgctgtcgcgtgtgcaagaagagcaggactttgtcgcgctcaagatgacg
gtgcgctgcagcaagggcacctatgtgcgtacgctggccgaggatattggccaggcgctg
ggctatggcgcgcatttgcgcagcctgcgccgcatagaaaccggtgggatcgacctgtcc
cgctgtatcagcctgcaaaccctggaagcgacgcccgatgcggagcgcctgcacaccgtg
ttgcctgtcgacacgttgctggcagcgcacacccgtgtcacgctcgatggtgataatgca
ggcagatttttgtccggcttgcgccggcggggtgaatgggccgatgccgatgcagtggcc
gtttatggagaagagcctcctgcgcttttgggtgtggcacacatccgggcgcgcgagctc
attcccgaccgcctcctaagccccgtcgagattcaacaaattttggaaggaacgccgcgc
ccacaagccagcggcattttggaaacatcatga
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