Comamonas squillarum: N4T19_08175
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Entry
N4T19_08175 CDS
T10846
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
csqu Comamonas squillarum
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csqu02000
]
N4T19_08175
Transporters [BR:
csqu02000
]
Other transporters
Pores ion channels [TC:
1
]
N4T19_08175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DEC-1_N
DUF748
MORN
Motif
Other DBs
NCBI-ProteinID:
UXC20804
LinkDB
All DBs
Position
complement(1741245..1741877)
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AA seq
210 aa
AA seq
DB search
MLFASAALATAAGAQIKAADGGNVVDNWQNGSGELVWKNGTNELCWRDANWTPATAAEGC
DGALVKAAPAPAPAPAATPAAPAPAPVAPPVAQTQKVTYAADAFFDFDKSVLKPEGKAKL
DDVASKVKNINLEVIIAVGHTDSIGSDAYNQKLSVRRAEAVKAYLVSKGIDKSRVYTEGK
GEKQPVADNKTAAGRAKNRRVEIEVVGTQK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgcctctgcagcgcttgcaaccgccgctggagcacaaattaaggctgctgac
ggcggcaatgtagttgacaactggcaaaacggcagcggtgagttggtctggaagaacggt
accaacgaactgtgctggcgcgatgctaactggacccctgctaccgctgctgaaggctgt
gacggtgccctggtgaaggctgctcctgcaccagcacctgcacctgctgctactccagct
gctcctgcacctgctccagtggctcctccagtggcccagactcaaaaggtcacctacgct
gctgacgcattcttcgacttcgacaagtcggtgctgaagccagaaggcaaggctaagctg
gacgatgtggcttccaaggtgaagaacatcaacctggaagtgatcatcgctgtgggtcac
accgactccatcggctccgatgcttacaaccaaaagctgtccgtgcgtcgcgctgaagct
gtgaaggcttacctggtgtccaagggcatcgacaagagccgcgtgtacaccgaaggcaag
ggcgaaaagcaaccagtggcagacaacaagactgcagctggccgcgccaagaaccgtcgc
gtggaaatcgaagtggtgggcacccagaagtaa
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