Comamonas squillarum: N4T19_08180
Help
Entry
N4T19_08180 CDS
T10846
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
csqu Comamonas squillarum
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csqu03032
]
N4T19_08180 (gyrA)
03400 DNA repair and recombination proteins [BR:
csqu03400
]
N4T19_08180 (gyrA)
Enzymes [BR:
csqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
N4T19_08180 (gyrA)
DNA replication proteins [BR:
csqu03032
]
Prokaryotic type
DNA Topoisomerases
N4T19_08180 (gyrA)
DNA repair and recombination proteins [BR:
csqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N4T19_08180 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UXC20072
LinkDB
All DBs
Position
1742129..1744990
Genome browser
AA seq
953 aa
AA seq
DB search
MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGMKPVHRRVLYAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM
RYTEIRLSKIAHEMLADIDKETVDFGPNYDGSESEPLVLPARVPNLLINGSAGIAVGMAT
NIPPHNLNEVVDACLHLLHHPDATVDDLMEIVPAPDFPTAGIIYGINGVKEGYRTGRGKV
VMRARVHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALINGQPKLCNLKDLIKVFLEHRRE
VVTRRTVYELRKARDRGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMAKSWDSKLV
REMLTRTRTDGGVINADDYRPEGLEVEFGMQQDGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYKDIMAVIEDLLDILAKPERVSTIIGEELVALKTEFGQTKLGARRSQVEYSAQDL
STEDLITPTDMVVTLSHTGYIKSQPLSEYRSQKRGGRGKQATATKEDDWIDQLFIANTHD
YLLCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQDDEKINVVLPLTGEYRSFPADH
YVFMATRMGTVKKTSLDEFSNPRKAGIIAVGLDDGDVLIGAALTEGRHDVMLFSDGGKAV
RFDENDVRPMGRNARGVRGMNIDDSQNLIAMLVAEQHPAEVEARKAKDALDNLQIRDKEL
QDAQAPAADIDAVRKQIDEARAALEAADLAAIAALGELPRETLHSVLTATENGYGKRTSI
VEYTRHGRGTKGMIAIQQSERNGKVVAATLVSPDDQIMLITDTGVLVRTRVAEIREMGRA
TQGVTLISLDAGAKLSGLQRIVENDAQADELADAADGAEAADGDDAPSPADGS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtttgctaaagaaacattgccgatcagcctggaagaggaaatgcgccgcagc
tacctcgattacgcgatgagcgtgatcgtcggccgcgccctcccagatgcccgcgacggc
atgaaaccggtgcaccgccgggttctgtatgcgatgcatgagctgaacaatgattggaac
cgcccttataagaagagtgcgcgtatcgtgggtgacgtgattggtaagtaccacccgcac
ggtgacagcgccgtctacgacactatcgtgcgcatggcccaggatttttccctgcgccat
atgctggtcgatggccagggcaacttcggctcggtggacggcgacagtgctgcggccatg
cgttataccgaaatccgcctgtccaagatcgcccacgaaatgctggccgatatcgacaag
gaaaccgtggacttcggccccaactacgacggctccgaaagcgagccgctggtgctgccc
gcgcgcgttcccaatctgctgatcaatggatcggccggtattgcggtgggtatggccacc
aatattcctccacataacttgaatgaagtggtggatgcctgcctgcacctgctgcaccat
cccgacgcgacggtcgatgacctgatggagatcgtgcctgcgcccgatttccccaccgcc
ggcatcatctacggcatcaatggcgtcaaggaaggctaccgcaccggccgcggcaaggtg
gtgatgcgcgccagggtgcatttcgaagacatcgacaagggccagcgccagtcgatcatc
gtcgacgagctgccctatcaggtcaacaagaagaccttgcaggagcgcatggccgagctg
gtgcacgagaagaagatcgaaggcatcagccacatccaggatgaatcggacaagtccggc
atgcgcctggtgatcgagctcaagcgcggcgaagtgcccgaggtggtgctcaacaacctg
tacaagcagacccagttgcaggacacctttggcatgaacatggtggccctgatcaatggc
cagcccaagctgtgcaacctgaaggacctgatcaaggtcttcctggagcaccgccgcgaa
gtagtcacgcgccgcaccgtgtatgagctgcgcaaggcacgcgaccgcggccatgtgctc
gaaggcctggccgtggcgctggccaacatcgatgacttcatcgccatcatccgcaacgcc
cccaccccgccggtggccaaggccgagctgatggccaagagctgggacagcaagctggtg
cgcgagatgctcacccgcacgcgcaccgatggcggcgtcatcaatgccgacgactaccgc
cccgaaggtctggaagtggaattcggcatgcagcaggacggcctctaccgcctgtccgaa
acgcaagcacaggaaatcctgcagatgcgtctgcagcgcctgaccggcctggaacaggac
aagatcgttgccgagtacaaggacatcatggcagtcatcgaagacctgctggacatcctg
gccaagcccgagcgcgtctcgaccatcatcggcgaagagctggtggccctgaagaccgag
ttcggccagaccaagctgggcgcacgccgcagccaggtcgagtacagcgcgcaggacctg
tccaccgaagacctgatcaccccgaccgacatggtggtgaccctgtcgcacaccggctat
atcaagagccagccgctgagcgaataccgctcgcaaaagcgcggcgggcgcggcaagcag
gcgacagccaccaaggaagacgactggatcgaccagctcttcattgcgaacacgcacgac
tacctgctgtgcttctccaaccggggccgcctgtactggctcaaggtctgggaagtgcct
gccggctcgcgcggctcgcgtggccgccccatcgtcaacatgttcccgctgcaggacgat
gagaagatcaacgtggtgctgccgctcaccggcgaataccgcagcttcccggccgatcac
tacgtcttcatggccacccgcatgggcaccgtcaagaagacctcgctggacgaattcagc
aacccgcgcaaggccggcatcatcgccgtgggcctggacgatggcgacgtgctgattggc
gcggcactgaccgaaggccgccacgatgtgatgctgttcagcgatggcggcaaggccgtg
cgcttcgatgaaaacgatgtgcgccccatgggccgcaatgcgcgcggcgtgcgcggcatg
aacatcgacgacagccagaacctgatcgccatgttggtggccgagcagcacccggccgaa
gtcgaagcgcgcaaggccaaggacgcgctggacaacctgcagatccgcgacaaggagctg
caggacgcccaggcaccggcggctgatattgacgcggtgcgcaagcagatcgacgaggcc
cgcgccgcgctggaagcggccgacctggccgccattgcggcgctgggcgagctgccacgc
gagacgctgcacagcgtgctgaccgccaccgaaaacggctacggcaagcgtacctcgatc
gtcgagtacacccgccacggccgtggcaccaagggcatgatcgcgatccagcagtcggag
cgcaacggcaaggtcgtggccgccaccctggtgagcccggatgaccagatcatgctgatc
accgacaccggcgtgctggtgcgcacccgggtggccgagatccgcgagatgggccgcgcc
acacagggcgtgaccttgatcagcctggatgcaggcgccaagctgagcggcctgcagcgc
attgtcgagaacgatgcgcaggcagacgagctcgccgatgcggccgatggcgccgaggcg
gcagacggcgacgacgccccaagcccggcagacggctcctaa
DBGET
integrated database retrieval system
