Comamonas squillarum: N4T19_08210
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Entry
N4T19_08210 CDS
T10846
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
csqu Comamonas squillarum
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csqu03032
]
N4T19_08210
03036 Chromosome and associated proteins [BR:
csqu03036
]
N4T19_08210
03400 DNA repair and recombination proteins [BR:
csqu03400
]
N4T19_08210
DNA replication proteins [BR:
csqu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
N4T19_08210
Chromosome and associated proteins [BR:
csqu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
N4T19_08210
DNA repair and recombination proteins [BR:
csqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
N4T19_08210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
UXC20077
LinkDB
All DBs
Position
1752557..1752883
Genome browser
AA seq
108 aa
AA seq
DB search
MTRSDLIEELAARFHQLTQRDAEQAVKTILEAIEDSLVRGQRIEIRGFGSFTITHRQPRL
GRNPRSGEAVQVPAKRVTHFKPGKALRESVDDPSNILTSTASPKNNDE
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgacccgatccgatctgattgaagagcttgccgctcgattccaccagctgacgcagcgg
gatgcggagcaggccgtcaaaacgattctggaggccatcgaagactcgctggtacgcgga
caacgcatcgagatccgtggctttggcagcttcaccatcacccaccgccaaccccgcctg
ggccgcaacccacgcagcggcgaagccgtgcaggtgcccgccaagcgcgtcacccacttc
aagccaggcaaggccttgcgcgaatcggtggacgaccccagcaatatcctgacctcgacc
gccagccccaagaacaacgacgaataa
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