Comamonas squillarum: N4T19_08550
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Entry
N4T19_08550 CDS
T10846
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
csqu Comamonas squillarum
Pathway
csqu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N4T19_08550
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csqu01007
]
N4T19_08550
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csqu03016
]
N4T19_08550
Enzymes [BR:
csqu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
N4T19_08550
Amino acid related enzymes [BR:
csqu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
N4T19_08550
Transfer RNA biogenesis [BR:
csqu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
N4T19_08550
Prokaryotic type
N4T19_08550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1b
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
UXC20142
LinkDB
All DBs
Position
1824333..1827236
Genome browser
AA seq
967 aa
AA seq
DB search
MSDTNSQPISQPGLDSLSKSFEPAAIEAHWGPEWEKRGYGNAGYRGTGAPNAESVAAQHN
FSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMKGYNTAWIPGTDHAGIATQIVVERQL
QAAGQSRYDLGRENFVAKVWEWKEQSGNTITTQMRRMGDTVDWSREYFTMDDKLSKVVTE
TFVKLYQQGLIYRGKRLVNWDPVLQSAVSDLEVENQEKDGSLWHIAYPLTSGEGQLVVAT
TRPETMLGDVAVMVHPEDTRYQHLIGQTVTLPLVGRQIPIIADDYVDREFGTGVVKVTPA
HDQNDYQVGQRHKLPMIVVLTLEAKINDEAPEKYRGMDRFVARKAIVADLEAQGLLVETK
KHKLMVPICDRTGQVIEPMLTDQWFIAMSKVSDQDPTGKSIAQKAIDAVASGQVQFVPEN
WVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEEGNIYVAKNEAEAQAQAPGKVLRRDAD
VLDTWYSSAMVPFSTMGWPEQGDAADDDFNLYLPSSVLVTGYDIIFFWVARMIMMTTHFT
GRVPFKHVYIHGLVRDAQGKKMSKSEGNVLDPVDLIDGIALEPLLDKRTVGLRKPETAPQ
VRKNTQKEFPEGIPAYGADALRFTFAALASLGRSINFDSKRCEGYRNFCNKLWNASRFVL
MNCEGHDCGLLEHSKDQCATGDYLQFSQPDRWIVSQLQKVEAEVAKGFAEFRLDNVANTL
YDFVWNEFCDWYLEIAKVQIQTGNEAQQRGTRRTLIRTLETILRLAHPIIPFVTEALWQK
VAPVAGREGASIAIAAYPQAQPEKIDNAAIAYVERIKQMVDACRALRGEMAVSPAQRLPL
LTVAGSAEGAAFLRANADVLKNLAKLSEVKVFDDEAAWAAEAQHAPVSVVGDARMALFVE
VDVDAEKLRLGKEIKRLEGEITKANAKLSNEAFCAKAPAAVLDQEKKRVADFGASLSKLQ
EQLQRLG
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccaacagccaaccgatctcccaaccaggtctcgatagcctgtccaagtct
tttgagcctgcggccatcgaggcccattggggcccggaatgggaaaagcgcggctacggc
aacgccggctatcgcggcaccggtgcgcccaatgcggaatcggtcgcggcgcagcacaac
ttctccatccagctgccgccccccaatgtgaccggcacgctgcacatgggccatgcgttc
aaccagacgatcatggactcgctcacccgctaccaccgcatgaagggctacaacacggcc
tggattccgggcaccgaccatgctggcattgccacccagatcgtcgtggagcgccagctg
caggccgcaggccaaagccgctatgacctgggccgcgagaactttgtcgccaaggtctgg
gagtggaaggagcagtcgggcaacaccatcactacgcagatgcgccgcatgggcgatacc
gtggactggagccgcgagtacttcaccatggacgacaagctctccaaagtggtgaccgag
accttcgtcaagctctaccagcaaggcctgatctaccgcggcaagcgcctggtcaactgg
gacccggtgctgcaatcggccgtgtccgacctggaagtggaaaaccaggaaaaggacggc
tcgctctggcacattgcctacccgctgaccagcggcgaaggccagctggtggtggccacc
acccgccccgagaccatgctgggcgacgtggccgtgatggtccaccccgaggacacgcgc
taccagcacctgatcggccagaccgtgaccctgccgctggtgggccgccagattccgatc
attgccgacgactatgtggaccgcgaattcggcaccggcgtggtcaaggtcacgcccgcg
catgaccagaacgactaccaggtcggccagcgccacaagctgccgatgatcgtggtgctg
accctggaagccaagatcaacgacgaggcgcccgagaaataccgcggcatggaccgcttt
gtcgcgcgcaaggccatcgtggccgacctcgaagcccaggggctgctggtcgagaccaag
aagcacaagctgatggtgcccatctgcgaccgtaccggccaggtgatcgagcccatgctg
accgaccagtggttcatcgcgatgagcaaggtcagtgaccaggacccgaccggcaagagc
attgcgcaaaaggccatcgacgccgtggcctcgggccaggtgcagtttgtgcccgagaac
tgggtcaacacctacaaccagtggatgaacaacatccaggactggtgcatttcgcgccag
ctgtggtggggccaccagataccggcctggtacgacgaagaaggcaacatctacgtcgcc
aagaacgaggctgaagcccaggcacaggcgcccggcaaggtattgcgccgcgacgccgat
gtgctcgacacctggtactcctcggcgatggtgcccttcagcaccatgggctggcccgag
cagggcgacgccgccgatgacgacttcaacctctacctgccctcgtcggtgctggtgacc
ggctacgacatcatcttcttctgggtcgcccggatgatcatgatgaccacgcacttcacc
gggcgcgtgccgttcaagcatgtctacatccacggcctggtgcgcgatgcgcagggcaag
aagatgtccaagtccgaaggcaatgtgctcgaccccgtcgacctgatcgatggcattgca
ctggagccgctgctggacaagcgcaccgtgggcctgcgcaagccggagacggcgccccag
gtgcgcaagaacacgcaaaaggagttccccgaaggcattcccgcctatggcgccgatgcg
ctgcgctttacctttgcagcgctcgcgtcgctgggccgttcgatcaacttcgacagcaag
cgctgcgaaggctaccgcaacttctgcaacaagctgtggaacgcctcgcgctttgtgctg
atgaactgcgaaggccatgactgcggtctgctggaacacagcaaggaccagtgcgccacg
ggcgactacctgcagttcagccagcccgaccgctggatcgtctcgcagctgcaaaaggtc
gaggccgaggtggccaagggctttgccgagttccgcctggacaacgtcgccaacaccctc
tatgactttgtctggaatgagttctgcgactggtacctggaaatcgccaaggtgcagatc
cagaccggcaacgaagcccagcagcgcggcacccgccgcacgctgatccgcacgctggag
accatcctgcgcctggcccatccgatcatcccgttcgtgaccgaagcgctgtggcagaag
gtggcacccgtggccggccgcgaaggcgcatcgattgcgattgccgcctacccgcaagcc
cagcccgagaagatcgacaacgcagcgattgcctatgtcgagcgtatcaaacagatggtg
gatgcctgccgtgcgctgcgcggagaaatggccgtgtcgcccgcgcagcgcctgccgctg
ctgacggtggccggctctgccgagggcgcagccttcctgcgcgccaacgccgatgtgctc
aagaacctggccaagctgagcgaggtcaaggtgtttgacgacgaagcggcctgggcggcc
gaagcccagcatgcccccgtgtcggtggtgggcgatgcgcgcatggcgctgtttgtcgaa
gtggatgtggacgccgagaagctgcgcctgggcaaggagatcaagcgcctcgaaggcgag
atcaccaaggccaacgccaagctgtccaacgaggctttctgcgccaaggcccccgctgcc
gtgctggaccaggagaaaaagcgcgtggcggactttggtgcctcgctcagcaagctgcaa
gagcagctccagcgcctgggttga
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