Comamonas squillarum: N4T19_08685
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Entry
N4T19_08685 CDS
T10846
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
csqu Comamonas squillarum
Pathway
csqu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N4T19_08685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csqu02000
]
N4T19_08685
Transporters [BR:
csqu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
N4T19_08685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Man-6-P_recep
Motif
Other DBs
NCBI-ProteinID:
UXC20168
LinkDB
All DBs
Position
complement(1854214..1857324)
Genome browser
AA seq
1036 aa
AA seq
DB search
MSPSRPFIQRPVATALLMLAIVLTGLVGFRLLPLSALPEVDYPTIQVQTLYPGASPEVMS
RTVSAPLERQLGQMSGLDRMASTSAAGVSIVTLQFQLGLSLDVAEQEVQAAINASSALLP
ADLPAPPIYAKVNPADTPVMSLAITSKELPLTEVQNIVNTRLAQKISQVTGVGLVSLEGG
QKPAMRIQANTQALAANGITLSSLRTAISNANSNTAKGSFDGPKRSYSINSNDQLLTAAD
YMNLVVSWKDGAPVMMKDVARVVASAENDRLAAWVDETPAIILNVQRQPGANVIATVDAI
KQRLPELTASLPASVEVKVLTDRTTGIRASVEHVQMELALAVVMVVLVIFFFLHSLRATV
IASLAVPISLIGSCGAMYLLGYSLNNLSLMALTIATGFVVDDAIVMIENIARYIEEGETP
MAAALKGAAQIGFTIISLTVSLIAVLIPLLFMGDIVGRLFREFAVTLAITILISAVVSLT
LVPMMSARWLKQEDTSAHTRGWASSVQRGFDKVIHHYDRGLHWVFRHQALTLVVAVATVV
LTGLLYLAIPKGLFPTQDTGQLQAQIEAAQEVSFARMSNLQRQAVSAILQDKDVASVSSV
VGVDAANNTMLNTGSLSINLTRPHDAQDEVMQRLRERVSQVAGVRIFLQPSQDLTIDSQT
GPTEYRLSIGGVNTDQVNDWTQKLVSQLQNVAQVRNATSDAGRKGLSAYVNVDRDTASRL
GISASSIDDSLYSAFGQRIVSTIFTETNQYRVILEAQQEQLNSVQTLGNLAINASSTGAT
PLSAIAKIEEQMAPLQVTRVSQYPAATLGFDTAPGVSLGHAVDAIKQATKDIGMPASLTM
EFLGAAAAYQNSLTSQLVLILAALVCVYIVLGVLYESYVHPLTILSTLPSAGVGALLALM
ISGNDLGVIGIIGIILLIGIVKKNAIMMIDFAIDAERNQGMAPQEAIHQAALLRFRPILM
TTLAALFAALPLMFGWGEGAELRRPLGLAIFGGLMLSQLLTLFTTPVIYLVFDRLGARFG
RRQAGTADGSHSEVQA
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagtccttcccgtccctttatccagcggccggtagcgacggccttgctgatgctggcc
atcgtgctgaccggtctggtgggctttcggctgctgccgctgtcggcgctgcccgaggtg
gattacccgacgatccaggtgcagaccctgtacccgggggccagccccgaggtgatgagc
cgcacggtgagtgcgccgctcgagcgccagctcggccagatgtccggcctggaccgcatg
gcatcgaccagcgcagcgggcgtgtccatcgtgaccttgcagttccagctgggcttgtcg
ctggatgtggccgagcaagaagtgcaggcggccatcaacgccagcagcgcgctgctgccg
gccgacctgcccgcgcccccgatttatgccaaggtcaatccggccgacacgccggtgatg
agcctggccatcacctccaaggagctgccgctcaccgaggtgcagaacatcgtcaatacg
cgcctggcgcagaagatcagccaggtcaccggcgtggggctggtcagcctggagggcggg
caaaagcctgcgatgcgcatccaggccaacacccaggcgctggcggccaatggcatcacc
ctgagcagcctgcgcactgccatcagcaatgccaattccaacaccgccaaaggcagtttt
gatggccccaagcgctcgtactcgatcaacagcaacgaccagctgctgaccgctgccgac
tacatgaacctggtggtgtcctggaaggacggcgccccggtgatgatgaaggatgtggcg
cgcgtggtggcgagcgccgagaacgaccggctcgccgcctgggtcgatgagacacccgcg
atcatcttgaacgtgcagcgccagcccggcgccaatgtgattgcgacggtggacgcgatc
aagcagcgcctgcccgagctcaccgcctccttgcccgcctcggtcgaggtcaaggtgctg
accgaccgcaccaccggcatccgcgcctcggtcgagcatgtgcagatggagctggcgctg
gccgtggtgatggtggtgctggtgatcttctttttcctgcacagcctgcgcgccacggtg
attgcgagcctggccgtgcccatctcgctgatcggcagctgcggggccatgtacctgctg
ggctacagcctgaacaacctgagcctgatggcgctgaccattgccaccggctttgtcgtc
gacgatgcgatcgtgatgatcgagaacattgcgcgctacatcgaggagggcgagacgccg
atggctgctgccttgaagggcgccgcgcaaattggctttaccatcatctcgctgaccgtg
tcgctgatcgcggtgctgattccgttgctcttcatgggcgatatcgtcgggcgtctgttc
cgcgaatttgcggtgaccctggcgatcaccatcctaatctcggcagtggtctcgctcacc
ttggtgccgatgatgtcggcgcgctggctcaagcaagaggacaccagcgcgcacacgcgc
ggctgggccagctcggtgcagcgcggtttcgacaaggtgatccaccactacgaccggggg
ctgcactgggtgtttcgccaccaggcgctgaccctggtcgtggccgtggccaccgtggtg
ctgacgggcctgctctacctggccatccccaagggcctgttcccgacgcaggacaccggc
cagctgcaggcgcagatcgaggcggcgcaagaagtgtcctttgcccgcatgagcaacctg
cagcggcaggccgtgagcgccatcctgcaggacaaggatgtcgcctcggtcagctcggtg
gtgggcgtggatgcggccaacaacaccatgctcaacaccggcagcctgtcgatcaacctg
acccggccgcatgatgcgcaggatgaggtgatgcagcgcctgcgcgagcgggtgagccag
gtggcgggggtgcgcatttttctgcagccctcgcaggacctgaccatcgactcgcaaacc
ggccctaccgaataccgcctgtcgatcggcggcgtgaacaccgaccaggtcaatgactgg
acgcaaaagctcgtcagccagctgcagaatgtggctcaggtgcgcaatgccacgagcgac
gccgggcgcaagggcctgtcggcctatgtgaatgtggaccgcgataccgcatcgcgcctg
ggcatcagcgccagcagcatcgatgacagcctctacagcgcctttggccagcgcattgtc
tcgacgatcttcacggagaccaaccagtaccgggtgattctggaggcgcagcaggagcag
ctcaacagcgtgcagaccctgggcaacctggccatcaatgccagcagcacgggcgctacg
ccgctgtcggcgattgccaagatcgaggagcagatggcgccgctgcaggtgacccgcgtg
tcgcagtacccggccgccaccctgggctttgacacggcgcctggcgtgtcgctgggccat
gcggtcgatgccatcaagcaggcgaccaaggacatcggcatgcccgcgtcgctgaccatg
gagttcctgggcgcagcggcggcctaccagaactcgctcaccagccagctggtcttgatt
ttggcggcgctggtctgcgtctacatcgtgctgggcgtgctgtacgagagctatgtgcac
ccgctcaccattctctcgaccctgccatcggccggcgtgggcgccttgctggcgctgatg
atcagcggcaacgacctgggcgtgatcggcatcatcggcatcatcttgctgatcggcatc
gtcaagaagaacgcgatcatgatgatcgactttgcgatcgatgccgagcgcaaccagggc
atggcaccgcaagaggccatccaccaggccgcgctgctgcgctttcggcccatcttgatg
acgaccttggccgccttgtttgccgcgctgccgctgatgtttggctggggcgagggcgcc
gagctgcgccgcccgctgggcctggccatttttggcgggctgatgctcagccagttgctg
accttgttcaccacgccggtgatctacctggtgtttgaccgcctgggtgcccgctttggc
cgccgccaagccggtactgcggatggaagccattccgaggtgcaggcatga
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integrated database retrieval system
