Comamonas squillarum: N4T19_10920
Help
Entry
N4T19_10920 CDS
T10846
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csqu Comamonas squillarum
Pathway
csqu03420
Nucleotide excision repair
csqu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N4T19_10920
03430 Mismatch repair
N4T19_10920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csqu03400
]
N4T19_10920
Enzymes [BR:
csqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N4T19_10920
DNA repair and recombination proteins [BR:
csqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N4T19_10920
MMR (mismatch excision repair)
Other MMR factors
N4T19_10920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UXC20578
UniProt:
A0ABY6A313
LinkDB
All DBs
Position
complement(2349410..2351860)
Genome browser
AA seq
816 aa
AA seq
DB search
MDSNDLFALPPDAGGSGHLPLLNGLNDEQLAAATLEGGHALILAGAGSGKTRVLTTRIAW
LLQTGRATPGGILAVTFTNKAAKEMLTRLSAMLPINVRGMWIGTFHGLCNRMLRAHYKSA
NLPQTFQILDTQDQLSAIKRLCKQFQVDEEALPPKQLQYFISGCKEEGLRPSDVQARDMA
ERKKVELYQLYEEQCLREGVVDFGELMLRSYELLRDNLPIRQHYQHRFRHMLVDEFQDTN
RLQYLWLKQLAGDMVGGKFQSHSSVIAVGDDDQSIYAFRGARVGNMQDFVREFEVRQQIK
LEQNYRSYSNILDSANALISHNSNRLGKNLRTDQGPGEPVRVSESATDMAEAQWMVEEIK
SLIKSDGFARSEIAVLYRSNAQSRILETSLFNAGVPYRVYGGLRFFERAEIKHALAYLRL
LENPHDDTSFMRVVNFPPRGIGARTTEQLQEGAQAAGCSLYDAVTAVAGKAGTKLQSFVA
MIDVLREETQGKTLRETIERMLVVSGLIEHYQSEKEGADRIDNLGELVTAAESFVTQEGF
GKDAIAIPLDEQQAMGVPGSGQSPVSQGLDPDAPLLDTPLPDAANPAMVNPDTGETLSPL
VAFLTHAALEAGDNQAQAGQDAVQMMTVHASKGLEFDVVFIGGLEEGLFPHENAMTDTGG
LEEERRLMYVAITRARKRLYLSTSQTRMLHGTTRYNVRSRFLDELPEGALKWLTPKHSGF
GSGMGSLAYGGGGGGRSSGGGYGDAAPSMWGKTPVPAQKAEPAHGIKKGAHVFHNKFGEG
KVLAVEGTGDDARAQVNFPRHGTKWLALSVAKLTVV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaatgatttgtttgcgctgccgcccgatgccggtggttctggccatttgcca
ctgctcaatggcctcaacgacgagcagctcgccgctgccaccttggagggcggccatgcg
ctgattctggccggcgccggctcgggcaagactcgggtgctgaccacgcgcatcgcctgg
ctgctgcagacgggccgtgccacgcccggcggcattctggcggtgacctttacgaacaag
gccgccaaggagatgctcacccgcctgtcggcgatgctgcccatcaatgtgcgcggcatg
tggatcggcaccttccacgggctgtgcaaccgcatgctgcgcgcgcattacaaatcggcc
aacctgccccagaccttccagatcctggacacgcaagaccagctctcggccatcaagcgc
ctgtgcaagcagttccaggtcgatgaggaggcgctgccacccaagcagctgcagtacttc
atcagcggctgcaaggaagaggggctgcgcccgtcggatgtgcaggcccgcgacatggcc
gagcgcaagaaggtcgagctctaccagctctacgaagagcaatgtctgcgcgaaggcgtg
gtcgattttggcgagctgatgctgcgctcctacgagctgctgcgcgacaacctgccgatc
cgccagcactaccagcaccgttttcgccatatgctggtcgacgagttccaggacaccaac
cgcctgcagtacctctggctcaagcagctggccggcgacatggtgggcggcaagttccag
tcccacagcagcgtgattgccgtgggcgacgacgaccagagcatctatgccttccgcgga
gcgcgcgtgggcaatatgcaggattttgtgcgtgagttcgaggtgcgccagcagatcaag
ctcgagcagaactaccgcagctacagcaacatcctcgacagcgccaatgcgctgatcagc
cacaacagcaaccgcctgggtaagaacctgcgcaccgaccagggcccgggcgagccggtg
cgggtgtccgagagcgccaccgacatggccgaggcgcagtggatggtcgaggagatcaag
tcgctgatcaagagcgatggctttgcgcgcagcgagattgccgtgctctaccgcagcaat
gcccaaagccggattctggaaaccagcctgttcaatgccggtgtgccctaccgcgtgtat
ggcggcctgcgctttttcgagcgtgcggaaatcaagcatgcgctggcctatctgcgcctg
ctcgagaacccgcatgacgacaccagcttcatgcgggtggtgaactttccgccacgcggc
attggtgcgcgcaccaccgagcaactgcaggaaggcgcgcaggccgctggttgctccttg
tacgacgcggtcaccgccgtcgccggcaaggcgggcaccaagctgcagtcctttgtcgcg
atgatcgatgtgctgcgcgaggaaacccagggcaagaccttgcgcgagaccatcgagcgc
atgctggtggtgagcggcctgatcgagcactaccagagcgaaaaggaaggcgccgaccgc
atcgacaacctgggcgagttggtgaccgccgccgagagctttgtcacgcaggaaggcttt
ggcaaggatgccatagcgataccgcttgatgagcagcaggccatgggcgtgccaggcagt
ggccaaagccccgtgagccaagggctggacccggatgccccgctgctcgataccccgctg
cccgatgccgccaatccggcgatggtgaaccccgacaccggcgagaccttgtcgccgctc
gtggcattcctcacgcatgccgcactggaggccggtgacaaccaggcccaggcgggccag
gatgccgtgcagatgatgaccgtgcatgccagcaagggcctggagtttgatgtggtcttt
atcggcgggctcgaagagggcctgttcccgcacgagaatgcgatgaccgacaccggcggg
ctcgaagaagagcgccgcctgatgtatgtggccatcacccgggcgcgcaagcgcctgtac
ctgagcacctcgcagacgcgcatgctccacggcacgacgcgctacaacgtgaggagccgc
tttctcgatgagctgcccgaaggcgcgctcaaatggctcacgcccaagcattcgggcttt
ggcagtggcatgggcagcctggcttacggcgggggaggcggcggccgctcatcgggcggt
ggttacggcgatgccgcgcccagcatgtggggcaaaacccccgtgccagcgcaaaaggcc
gagcccgcgcatggcatcaaaaagggcgcccatgtgttccacaacaagtttggcgaaggc
aaggtgctggcggtggaaggcacgggtgacgatgcgcgcgcccaggtgaattttccgcgc
catggcaccaagtggctggcgctgtcggtggccaagctgacggtggtgtaa
DBGET
integrated database retrieval system
