Comamonas squillarum: N4T19_11415
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Entry
N4T19_11415 CDS
T10846
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
csqu Comamonas squillarum
Pathway
csqu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N4T19_11415 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csqu03400
]
N4T19_11415 (mutM)
Enzymes [BR:
csqu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
N4T19_11415 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
N4T19_11415 (mutM)
DNA repair and recombination proteins [BR:
csqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N4T19_11415 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
NFACT_N
Lar_restr_allev
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UXC20666
LinkDB
All DBs
Position
complement(2458186..2458998)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVEVTRRGLVAPLQGARIASVRMGKPLRWPLGIDTAALAGRTITEVQRRGKYIVL
VLDQGVVLIHLGMSGSLQVSPMDAPAGPHDHFDLLTDQHLLRLHDPRRFGAVVWSPDADS
GMAAKLLSNLGVEPLGAGFNVEHLWAGLQKSRTPIKQLLLGGQVVVGVGNIYASEVLFLA
GISPTKPANQTTRPQAKRLHAAIVEVLTRSIALGGSTLRDFVQVNGYAGAFQAQASVYGR
AGEPCPQCGQPVQLIKQGQRSTYYCKRCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagttaccagaagtggaagtcacgcggcggggattggttgcgccgctgcaaggc
gcgcgcattgcctccgtgcgcatgggaaaacctttgcgctggccgctgggcatcgatacc
gccgccttggccgggcgcaccatcaccgaggtgcagcgccggggcaaatacattgtgctg
gtgctggaccagggcgtggtgctgatccaccttggcatgtccggcagcctgcaggtcagc
cccatggatgcgccagcgggcccgcatgaccattttgacttgctcaccgaccagcacctg
ctgcgcctgcatgacccgcgccgttttggggcggtggtctggtcgcccgatgccgactcc
ggcatggccgccaagctgttgtccaatctgggcgtggagcccttgggcgccggcttcaac
gtggagcacctctgggccgggctgcaaaagtcgcgcacgccgatcaagcagctgctgctg
ggcggccaggtggtcgtgggcgtgggcaatatctacgccagcgaggtgctgttcctggcc
ggcatctcgccgaccaaaccggccaaccagaccacgcggccccaggcgaaacgcctgcat
gcggcgattgtggaggtgctgacccgctccattgcgctgggtggcagcaccttgcgcgat
tttgtccaggtcaatggctatgccggtgccttccaggcgcaggccagcgtctatggccgg
gccggagagccctgcccgcaatgcggccagccggtgcagctcatcaagcaagggcagcgc
agcacctattactgcaagcgctgccagaaataa
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