Comamonas squillarum: N4T19_11530
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Entry
N4T19_11530 CDS
T10846
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
csqu Comamonas squillarum
Pathway
csqu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N4T19_11530 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csqu01007
]
N4T19_11530 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csqu03016
]
N4T19_11530 (aspS)
03029 Mitochondrial biogenesis [BR:
csqu03029
]
N4T19_11530 (aspS)
Enzymes [BR:
csqu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
N4T19_11530 (aspS)
Amino acid related enzymes [BR:
csqu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
N4T19_11530 (aspS)
Transfer RNA biogenesis [BR:
csqu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
N4T19_11530 (aspS)
Prokaryotic type
Other AARSs
N4T19_11530 (aspS)
Mitochondrial biogenesis [BR:
csqu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
N4T19_11530 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
DUF4388
Motif
Other DBs
NCBI-ProteinID:
UXC20687
LinkDB
All DBs
Position
complement(2479496..2481304)
Genome browser
AA seq
602 aa
AA seq
DB search
MAMRSQYCGQVTEAQMGETVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFK
VAEDVRNEFCVQVKGLVRARPEGTTNDSIKSGKIEVLCHELTVLNASVTPPFQIDDENLS
ETVRLTNRVLDLRRPTMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYL
VPSRVHDGEFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQPEFTQIDCETS
FLNEEEIRAIFQRMIKEVFQTQLNVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELTD
VMKDVDFKVFSGAANMKGGRVVGLRVPGGAREQGGLSRGDIDAYTDFVKIYGAKGLAYIK
VNELAKGRDGLQSPIVKNIHDAAIAEILKRTEAQDGDLIFFGADKEKIVNDAIGALRIKI
GHSAFGKSTGLFEDRWAPLWVVDFPMFEHDEENDRWAAVHHPFTSPKDGHEDLMDTDPGK
CIAKAYDMVLNGWELGGGSVRIHRADVQSKVFTALKISAEDARAKFGYLLDALQYGAPPH
GGLAFGLDRLITLMTGSESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKLRNPAG
AQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcgttcccaatactgcggtcaagtgaccgaagcccaaatgggcgaaaccgtg
agcctgtgcggctgggtcaatcgccgccgtgaccacggtggtgtgattttcatcgacctg
cgtgaccgcgaaggctatgtgcaggtggtctgcgatcctgaccgcgccgagatgttcaag
gtggccgaagacgtgcgcaatgagttctgcgtgcaggtcaagggcctggtgcgtgcccgt
cctgaaggcaccaccaatgactcgatcaagagcggcaagatcgaagtgctgtgccacgag
ctgaccgtgctcaacgcctcggtgacgcctccattccagatcgacgacgagaacctgtcg
gagaccgtgcgcctgaccaaccgcgtgctggacctgcgccgccccacgatgcagcgcaac
atgatgctgcgctacaagacggcgatccaggtgcgcaacttcctggacaaggaaggcttc
atcgacatcgaaacgccgatgctgggcaagagcacgcccgaaggcgcgcgtgactacctg
gtgcccagccgcgtgcacgatggcgaatttttcgcgctgccccagtcgccccagctgtac
aagcagatgctgatggtggccggctacgatcgctactaccagatcaccaagtgcttccgc
gacgaagacctgcgtgctgaccgccagcccgagttcacgcagatcgactgcgaaacctcg
ttcctgaacgaggaagagatccgcgccatcttccagcgcatgatcaaggaagtgttccag
acccagctgaatgtggacctgggcgagttcccgatcatgacctaccaggatgcggccttc
cgctttggctcggacaagcctgacctgcgcgtcaagctcgagttcaccgagctgaccgac
gtgatgaaggacgtggacttcaaggtcttctcgggcgccgccaacatgaagggcggccgc
gtggtgggcctgcgtgtgccaggtggtgcgcgcgagcagggcggtctgtcgcgtggcgac
atcgatgcctacaccgacttcgtcaagatctatggcgccaagggcctggcctacatcaag
gtcaacgagctggccaagggccgtgacggcctgcagtcgcccatcgtcaagaacatccat
gacgccgcgattgccgagatcctcaagcgcaccgaagcgcaagacggcgacctgatcttc
tttggcgccgacaaagaaaagatcgtcaacgacgccatcggcgcgctgcgcatcaagatc
ggccacagcgcctttggcaagagcaccggcctgtttgaagaccgttgggcaccgctgtgg
gtggtggacttcccgatgttcgaacacgacgaggaaaacgaccggtgggcggccgtgcac
caccccttcacctcgcccaaggacggccatgaggacctgatggacaccgatcctggcaag
tgcattgccaaggcctacgacatggtgctcaacggttgggaactgggcggtggctcggtg
cgtatccaccgcgccgatgtgcagtccaaggtgttcaccgcgctcaagatcagcgccgaa
gatgcacgtgccaagttcggctacctgctggatgcgctgcagtacggcgcgcctccccac
ggtggcctggcctttggtctggaccgtctgattaccttgatgaccggctccgagtcaatc
cgtgacgtgatcgccttccccaagacccagcgcgcccaggacctgctgacccaggcccca
tcgccagtggacgaaaagcagctgcgcgagttgcacatcaagctgcgcaaccctgccggc
gcgcagtaa
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