Comamonas squillarum: N4T19_12630
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Entry
N4T19_12630 CDS
T10846
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
csqu Comamonas squillarum
Pathway
csqu00280
Valine, leucine and isoleucine degradation
csqu00650
Butanoate metabolism
csqu00907
Pinene, camphor and geraniol degradation
csqu01100
Metabolic pathways
csqu01120
Microbial metabolism in diverse environments
csqu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
N4T19_12630
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
N4T19_12630
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
N4T19_12630
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
N4T19_12630
Enzymes [BR:
csqu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
N4T19_12630
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
UXC16603
UniProt:
A0ABY5ZRQ8
LinkDB
All DBs
Position
complement(2728499..2729410)
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AA seq
303 aa
AA seq
DB search
MARYPQRVQLIDVGPRDGLQNEKSPVPAAVKIELTHRLQDAGLTEIEVTSFVSPKWVPQM
GDNAEVMAGLARKAGVRYSVLTPNMKGYEAAVASQPDEIVVFGAASEAFSQRNINCSIAE
SIERFAPVVEAAKAAGIAVRGAMSCTVGCPYEGEIAPSRVAYLAELMKGIGVERVDVADT
IGVGTPIKVQKALEATLQYFNLDQVSGHFHDTYGQALPNTLASLELGIWNFQSSIAGLGG
CPYAKGATGNVATEDLVYMLHGMGIETGIDLDKLVDAGIYISDFLQRKPNSRVAVALMNK
RAG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctacccccaacgtgtccaattgattgatgtcggcccgcgcgatggcctgcag
aacgagaaatcgccggtgccggctgccgtcaagatcgagctcacccaccgcctgcaggat
gcgggcctgaccgagatcgaggtgaccagctttgtcagccccaagtgggtgccgcagatg
ggcgacaacgccgaggtgatggcggggctggcgcgcaaggccggggtgcgctattcggtg
ctgaccccgaacatgaagggctatgaagcggccgtggcctcccagcccgatgagatcgtg
gtgtttggcgcggccagcgaagccttcagccagcgcaatatcaactgctcgattgccgag
agcatcgagcgctttgcgccggtggtggaagcggccaaggccgccggcattgcggtgcgt
ggcgcgatgagctgcaccgtgggctgcccgtatgagggcgagattgcgccttcgcgcgtg
gcctacctcgccgagctgatgaagggcattggcgtcgagcgcgtcgatgtcgccgacacc
atcggcgtgggcacgccgatcaaggtgcaaaaggcgctggaagcgaccttgcagtatttc
aacctggaccaggtgagcgggcatttccacgacacctatggccaggcgctgcccaatacg
ctcgcgtcgctggagctgggtatctggaacttccagtcatccatcgccggcctgggcggc
tgcccctatgccaagggcgcgaccggcaacgttgccaccgaagacctggtctacatgctg
catggcatgggcatcgagaccggcattgacctggacaagctggtcgatgcgggcatctac
atcagcgactttttgcagcgcaagcccaactcgcgcgtggccgtagcgctgatgaacaag
cgcgcgggttga
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