KEGG   Comamonas squillarum: N4T19_13090
Entry
N4T19_13090       CDS       T10846                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
csqu  Comamonas squillarum
Pathway
csqu00521  Streptomycin biosynthesis
csqu00523  Polyketide sugar unit biosynthesis
csqu00525  Acarbose and validamycin biosynthesis
csqu00541  Biosynthesis of various nucleotide sugars
csqu01100  Metabolic pathways
csqu01110  Biosynthesis of secondary metabolites
csqu01250  Biosynthesis of nucleotide sugars
Module
csqu_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:csqu00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    N4T19_13090 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    N4T19_13090 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    N4T19_13090 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    N4T19_13090 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    N4T19_13090 (rfbB)
Enzymes [BR:csqu01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     N4T19_13090 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 3Beta_HSD
Other DBs
NCBI-ProteinID: UXC16676
UniProt: A0ABY5ZS09
LinkDB
Position
complement(2834248..2835303)
AA seq 351 aa
MILVTGGAGFIGSNFVLDWLAGSDEPVVNLDKLTYAGNLHNLESLQGDSRHHFVHGDIGD
RALLDRLLAEHQPRAIVHFAAESHVDRSIHGPEDFIQTNVVGTLRLLEAARAYWSGLEGE
RKTGFRFLHVSTDEVYGSLEKDDPAFTETHNFEPNSPYSASKAASDHLVRAWFHTYGLPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKNLPVYGDGMQIRDWLYVKDHCSAIRRVLEA
GRLGETYNVGGWNEMPNIEIVQHVCRLLDAQRPRADGQSYAEQIIYVKDRPGHDRRYAID
ARKLEKELGWKPAETFDSGIRKTVQWYLDHQDWVAQVQSGDYKDWVSKQYA
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgattctcgtcaccggaggcgccggctttatcggctcgaattttgtgttggactggctg
gcgggttcggatgaaccggtggtcaatctcgacaagttgacctacgcgggcaatctgcac
aacctagaaagcctgcagggcgacagccgccaccattttgtgcacggcgatatcggcgac
cgcgcgctgctcgaccgcctgctggccgagcaccagccgcgcgccatcgtgcactttgcc
gccgaaagccatgtggaccgctcgatccacggccccgaggatttcatccagaccaatgtg
gtgggtaccctgcgcctgctggaggccgcccgtgcctactggagtggcctggaaggcgag
cgcaagaccggtttccgctttctgcacgtatcgaccgatgaggtctacggcagcctggaa
aaggacgacccggccttcacagaaacccataacttcgagcccaacagcccctacagcgca
agcaaggcggccagcgaccatctggtgcgtgcctggttccacacctatggcttgccggtg
ctgaccaccaactgctcgaacaactacggcccctaccacttccccgagaagctgatccct
ttgatgatcgtcaacgcgctggcgggcaagaacctgcccgtgtatggcgacggcatgcag
atccgcgactggctctatgtcaaggaccactgcagcgccatccgccgcgtgctggaggcg
ggccgtctgggcgagacctacaacgtgggcggctggaacgagatgcccaatatcgagatc
gtccagcatgtctgccgcctgcttgacgcccagcgcccgcgtgccgatggccagtcttac
gccgagcagatcatctatgtaaaggaccgccccggccatgaccgccgctatgcgatcgat
gcgcgcaagctggagaaggaactgggctggaagccggctgaaacctttgacagcggcatc
cgcaagaccgtgcagtggtacctggaccaccaggattgggtggcccaggtgcagtcgggt
gactacaaggactgggtcagcaagcagtacgcctga

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