Comamonas squillarum: N4T19_14365
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Entry
N4T19_14365 CDS
T10846
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
csqu Comamonas squillarum
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csqu02000
]
N4T19_14365
Transporters [BR:
csqu02000
]
Other transporters
Pores ion channels [TC:
1
]
N4T19_14365
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UXC16900
LinkDB
All DBs
Position
complement(3103165..3105210)
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AA seq
681 aa
AA seq
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MSSSAPLAAGRAPARPLRLDFHPLPSAPQRHALRAIAGVVAGMLVHGAAAAQTADAEGQA
ASDKTLGTVVVTAAGFEQEVTQAPASITVIPREKLEQGAYSNLHDALRDVPGVIMTPSDN
NSNDISLRGMGANYTLILVDGKRMSTRETQTNGSTGTDQSWVPPLEAIERIEVVRGPMSS
LYGSDAMGGVVNIITRKVAKEWHGSLRADATLQERSASGNAYQSNFYLSGPIKDELLGIS
LYGNYSKRDEDRIYQGYNDSDTKALNARIALTPNKDHDIIAEVGSARQHFISTPGKTLLE
TGELSDRKFERENYSLQHKGRWGWASSDTYVQHEKTRNISREMTIKNTVANSSWVIPVGD
AHIVSTGLYYNKQDLTDTTTNTLPGSNRTTADRTQYAWFAEDEWRLPEDFALTGGLRYDH
DSKGGSQWSPRLYGVWNLSPRWTVKGGVSTGFRAPSLRQTLGDWGQASRGGNIYGNPDLK
PEKSLSKEVGVLYNDGAGLSAGLTVFDNDFRDKITRIACPECGPLNSSGNTPTTNVNIDK
AVTRGIEATLTMPLARSLDLNSSYTFTRSEQKSGEFAGQPLSQLPRHMLNVALDWKPSDR
WNGWTKLSYRGKESQPTGGRSARTWVAGSYAMFDVGGSFHYNKNTTFFAGIYNLFDKDVY
YEDYATVQDGRRYWVGMNLKF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctctgccccgttggcagcgggtcgcgcgccagcacggcctctgcgtcttgat
ttccacccactgccatcggcaccccagcgccatgcactgcgcgccatcgcgggcgtggtg
gccggcatgctggtccatggcgcagcggccgcgcagacggccgatgccgaagggcaagct
gccagcgacaaaacgctgggcaccgtggtggtgaccgccgctggttttgagcaggaggtg
acccaggcgccggcctcgatcaccgtgattccgcgcgagaagctcgagcagggcgcgtac
agcaacctgcatgacgcgctgcgcgatgtgcccggcgtcatcatgacgccctcggacaac
aactccaacgacatcagcctgcgcggcatgggtgccaactacaccttgatcctggtcgat
ggcaagcgcatgagcacgcgcgagacgcagaccaatggctcgacggggaccgaccaaagc
tgggtgccgccgctcgaagcgatcgagcgcatcgaggtggtgcgtgggcccatgtcctcg
ctctacggctcggacgcgatgggcggcgtggtcaacatcatcacgcgcaaggtcgccaaa
gagtggcatggctcgctgcgtgccgacgccaccttgcaggagcgctcggcatcgggcaat
gcctaccagagcaacttctacctctcgggcccgatcaaggacgagctgctgggcatcagc
ctctacggcaactacagcaagcgcgacgaagaccgcatctaccagggctacaacgacagc
gataccaaggcgctcaacgcccgcattgcgctcacgcccaacaaggaccacgacatcatt
gccgaagtgggttcggccaggcagcactttatctccacgccgggcaagaccttgctggag
accggcgagctgtcggaccgcaagttcgagcgtgagaattactcgctgcagcacaagggc
cgctggggctgggcctcgtccgatacctatgtgcagcatgagaagacacgcaatatctcg
cgcgagatgaccatcaagaacacggtggccaacagcagctgggtgattccggtgggcgac
gcgcacatcgtcagcaccggcttgtactacaacaagcaggacctgaccgacaccaccacc
aacaccttgcccggcagcaaccgcaccaccgccgaccgcacccagtacgcctggtttgcc
gaagacgaatggcgcctgcccgaggactttgcgctgaccggtgggctgcgctatgaccac
gacagcaagggcggctcgcaatggagcccgcgcctgtatggcgtgtggaacctgagcccg
cgctggactgtcaagggcggcgtctcgaccggcttccgcgccccatccttgcgccagacc
ctgggcgactggggccaggccagccgaggcggcaatatctatggcaacccggatctgaag
ccggagaaatcgctgtccaaggaagtgggcgtgctctacaacgatggcgccggcctgtcg
gcaggcctgacggtatttgacaacgacttccgcgacaagatcacccgcattgcctgcccc
gagtgtgggccgctgaattcgtccggcaacacgcccaccaccaatgtcaatatcgacaag
gcggtgacgcgcggcatcgaggcaacgctgaccatgccgctggcgcgcagcctggacctg
aactccagctacacctttacccgctccgagcaaaagagcggcgagttcgccggccagccg
ctgtcgcagctgccgcgccacatgctcaatgttgcgctcgactggaagccgtcggaccgc
tggaacggctggaccaagctgtcctaccggggcaaggaaagccagcccactggcggccgc
tcggcccgcacctgggtcgctggcagctatgcgatgttcgatgtgggcggctcgttccac
tacaacaagaacaccaccttctttgccggcatctacaacctgttcgacaaggacgtgtac
tacgaagactacgccaccgtgcaggatgggcgccgttactgggtcggcatgaacctgaag
ttctaa
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