Comamonas squillarum: N4T19_14370
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Entry
N4T19_14370 CDS
T10846
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
csqu Comamonas squillarum
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csqu02000
]
N4T19_14370
Transporters [BR:
csqu02000
]
Other transporters
Pores ion channels [TC:
1
]
N4T19_14370
BRITE hierarchy
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
TrbC
Motif
Other DBs
NCBI-ProteinID:
UXC16901
LinkDB
All DBs
Position
complement(3105606..3107672)
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AA seq
688 aa
AA seq
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MTARPLAACAARHSLLLHASPSPRSAVPHAWRATALVAAALLAAGPALAQTEAEADKTLS
TVVVTASGFEQAVEDAPASITVIPRQELEKKAYRDVTDALRDVPGVVITGGGSSSDISIR
GMASNYTMILVDGKPQNSRETRPNSDGAGIEQGWLPPLSAIERIEVVRGPMSSLYGSDAM
GGVVNIITRKVAKAWTGTLSAETTQQESSSSGDIYQSNFYLAGPIQSEVLGLQIYGQKSR
RLEDRFVGGFNEQDSSSGTAKLTLTPNKDHDLALEVGRTLQDRYATAGKSASRASSYSDY
ARNHIALSHTGRWGFGTSTTYLQHEEIDNPGRQMNLKNTEFNSQIVVPIGERNLTTLGLS
YKHEKLVDNGNQMKVDNPINTLKRYQWALFAENEWRVTDAIALTTGLRMNHDQNYGTDWT
PRVYGVWHATPEWSVKGGISTGFKSPSLRAAVADWGQITGGGGDPAIIRGNPNLKPEKST
SQELGVIWDNRRDFTGSLTLFNTDFKDKITEVRSCEDTEGGGRAIVTGNCTVLGTPYKFI
SDRTNVDKATMRGVEATATWKASEALRLAANYTFTRSEQKSGRFAGQPLNKMPKHMLNAT
LDWQGTDKLGVWSRLNFRGKSSDYLSRTSMAKGTPSFTFMDLGLNYAYSKDVRFSTGIYN
LFDKRVDSATYDAVYDGRRYWAKVMVGF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccgcccccttgcagcctgcgctgcccgccattccttgctgttgcacgccagc
ccgtcgccgcgcagtgccgtgccccatgcatggcgcgccacggcgctggtggccgctgcc
ctgctggctgcgggccctgcgctggcgcagaccgaggcggaggccgacaagaccttgtcg
accgtggtggtgacagcctcgggctttgagcaggcggtagaagatgcaccggcctcgatc
acggtgattccgcgccaggagctggagaaaaaggcctaccgcgatgtgaccgatgcgctg
cgcgatgtgcccggcgtggtcatcaccggcggcggcagctccagcgacatcagcatccgg
ggcatggcctcgaactacacaatgatcctggtggatggcaagccgcaaaactcgcgcgag
acccgccccaacagcgatggcgccggcatcgagcaaggctggttgccgccgctcagcgcc
atcgagcgcatcgaggtggtgcgcggccccatgtcctcgctttacggctcggatgcgatg
ggcggtgtggtcaacatcatcacgcgcaaggtggccaaagcgtggaccggcaccctgagc
gccgagaccacgcagcaggagtcttcatcgtcgggtgatatctaccagagcaacttctac
ctggccggcccgatccagagcgaggtgctgggcctgcagatctatggccagaaatcgcgc
aggctggaggacaggtttgtcggcggcttcaacgagcaagacagcagctcgggcaccgcc
aagctcacgctcacgcccaacaaggaccacgacctggcgctcgaagtgggccgcaccctg
caggaccgctatgcgacggccggcaagagcgcgagccgcgcctccagctactcggactat
gcgcgcaaccacatcgccctctcgcacaccgggcgctggggctttggcacctcgaccacc
tacctgcagcacgaggagatcgacaacccaggccgccagatgaacctcaagaacaccgag
ttcaacagccagatcgtggtgccgatcggcgagcgcaacctgaccaccttgggcctgagc
tacaagcatgaaaagctcgtggacaacggcaaccagatgaaggtcgacaacccgatcaac
acgctcaagcgctaccagtgggcgctgtttgccgagaacgaatggcgggtgaccgatgcg
attgcgctgaccaccggcctgcgcatgaaccatgaccagaactacggcaccgattggacg
ccgcgcgtctatggcgtctggcatgcaacgcccgagtggagcgtcaagggcggtatctcc
accggcttcaaatcgcccagcctgcgcgctgcggtggccgattggggccagatcaccggc
ggcggtggcgacccggccatcatccgaggcaaccccaacctcaagcccgagaaaagcacc
agccaggagctgggcgtgatctgggacaaccgccgcgatttcaccggcagcctgaccctg
ttcaacaccgacttcaaggacaagatcaccgaggtgcgcagctgtgaggacaccgagggc
ggcggccgcgccatcgtcaccggcaactgcacggtgctgggcacgccctacaagttcatc
agcgaccgcaccaatgtcgacaaggccaccatgcgcggcgtggaagcgactgccacctgg
aaggccagcgaagcgctgcgcctggcggccaactacaccttcacccgttcggagcaaaag
agcggccgctttgccggccagccgctcaacaagatgcccaagcacatgctcaacgccacc
ctggactggcagggcacggacaagctgggcgtctggagccgcctcaacttccggggcaag
agctcggactacctgagccgcacctcgatggccaagggcacgccgtcctttacgttcatg
gacctgggcctgaactatgcctacagcaaggatgtgcgtttcagcaccggcatctacaac
ctgttcgacaagcgggtcgatagcgccacctatgacgcggtctatgacggccgccgttac
tgggccaaggtgatggtgggtttctaa
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