Comamonas squillarum: N4T19_19635
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Entry
N4T19_19635 CDS
T10846
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
csqu Comamonas squillarum
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csqu03400
]
N4T19_19635
DNA repair and recombination proteins [BR:
csqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N4T19_19635
Archaeal homologous recombinant proteins
N4T19_19635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_15
RsgA_GTPase
nSTAND3
AAA_21
cobW
AAA_16
MeaB
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UXC17879
LinkDB
All DBs
Position
complement(4302552..4305998)
Genome browser
AA seq
1148 aa
AA seq
DB search
MKIRSLRLKNLNSLKGEWRIDFTAAPFADNSLFAITGPTGAGKSTLLDAICLALYHQTPR
LATLSASSNDLMTRHTADCMAEVVFEVKGILYRAFWSQRRARDRASGALQAPRVELARVA
DGVILSTHSNDKLRQMAEITGLDFPRFTKSMLLAQGGFAAFLEAKANERAELLEELTGTD
IYSQISQAVFERARDARQALERDQAQAGGMQLLPEAERAQLQAEAQQLQDTLATLQTRHA
ALQGLQHWQQHTAQAAQAQHQAQERLQQAQQALQAAAPDLQRLQAHGPAQAIAPLHTGWQ
QAQAAAAASQAQQTQLQGRLADAQRQQWQLQQHASALAQQAQQQAEQAVHQLHTQQSDLQ
HWLQQHPAHARLGDQLSGWREQLAQRQQQQRQWAQEQAALQQAQQQGQSLQQQIARQATE
LQQAQAAQQQADAAARELQHAQHTRLAPHGGSLGQLRAHWQTAQQHEQAWQQLLQHAEQR
QPLARDAQQLGDALQACSAPLAQQQATLAALRSQYKAQKERVADKQRLLAQEERIQSLEA
HRHALQPGEACPLCGSQEHPAIAAYAALDVSATAAALQAAQAELDALQQQGEQLGAAHAA
ALSQQTSLQAQLTAAEQRLDAWQQRWQTLCTAMAQPIAASAWQQPHTLAEAQQASAAQAA
QLQQALAAAEAAEQALQAAKDAAHAADQTLQDAQHAQARLQQAQQDNSSLQQRLSQTVQA
LQAQADAAEAALQSSLAPLGLVIPPADGHDAWLQTRQQEWQQWQQHSAQLQTTAQQLALQ
QQQAQQCAQEAQQWQQRLAQLPAPSPAQTGAATIALPATLADCAALLEQTRQELASLQGQ
AQQAGQQLAERQWALEQAQAAWNQGLEASPFADAQAFAHALLPADALERLSQQRDGLQLA
LQRASTVAEETAQQHQHLQAQALTEEAPEALAAQLRALEDERNQTAERMGAQRARLADDD
QRRAGQQDLLAQIAAQERDSALWQRLDGLIGSAKGDKFRKFAQGLTLDHLLALANGHLAR
LHGRYLLQRKTTGELELDIVDSWQGDVARDTRTLSGGEAFLVSLALALALSDLVSSKTSI
DSLFLDEGFGTLDGDTLEIALTALDTLNASGKMIGIISHVEALKERIPAQIRVEKGAGIG
YSRLELQG
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacgcagcctgcggcttaaaaacctgaactcgctcaaaggcgaatggcgcatt
gacttcacagctgcgccctttgccgataacagcctgtttgcgatcaccggccccacgggc
gcgggcaaatcaaccttgctcgatgcgatttgcctggcgctctaccaccagacaccccgg
ctggcgaccctcagcgccagcagcaatgacctgatgacgcgccacacggcagattgcatg
gccgaggtggtgttcgaggtcaagggcatcctctaccgcgccttctggagccagcgccgc
gcccgcgacagggccagcggcgcgctgcaggcgccccgggtggagctggcgcgcgtggcc
gatggcgtaatcctgagcacgcatagcaacgacaagctgcgccagatggccgagatcacc
gggctggattttccgcgctttaccaaatcgatgctgctggcccagggcgggtttgccgcg
tttttggaggccaaggcgaatgaacgcgccgagctgctcgaagagctgaccggcaccgac
atctacagccagatatcgcaagccgtgtttgagcgcgcccgcgatgcccgccaggcgctg
gagcgcgaccaggcgcaggccggcggcatgcagctgctgcccgaggccgagcgcgcgcag
ctgcaggccgaggcccagcaactgcaagacaccttggccactttgcagacgcgccatgcc
gcgctgcaaggcctgcagcactggcagcagcacaccgcgcaagcggcgcaggcgcagcac
caggcccaggaacgcctgcagcaggcccagcaagcgctgcaggctgccgcccccgatctg
caacgcctgcaggcccatggcccggcacaggcgattgccccgctgcatactggctggcag
caggcgcaagcggccgctgcagcaagccaggcacagcagacccaattgcagggccgcctg
gccgatgcccagcgccagcagtggcagctgcagcagcatgccagcgcgctggcgcagcag
gcccagcagcaagccgagcaggctgtgcaccagttgcacacccagcagagcgatctgcag
cactggctgcagcagcacccagcccatgccaggttgggcgaccagctgagcggctggcgc
gagcagctggcacagcgccagcagcagcagcggcagtgggcgcaagaacaagccgcgttg
cagcaagcccagcagcagggccagtcgctgcagcagcagatagcgcgacaggccaccgag
ttgcagcaggcccaggccgcgcagcagcaggccgatgctgcggcgcgcgagctgcagcac
gcgcagcacacccgcctggccccgcatggcggcagcctgggccagttgcgcgcccactgg
cagacggcccagcagcacgagcaagcctggcagcaattgctgcagcatgccgagcaacgc
cagccgctggcgcgcgatgcgcagcaactgggcgatgccttgcaggcctgctcggcaccg
ctggcccagcagcaggccacgctggccgcgctgcgcagccagtacaaggcgcagaaagag
cgcgtggccgacaaacagcgcctgctggcgcaggaagagcgcatccaaagcctggaagcc
caccgccatgcgctgcagcccggcgaggcctgccccctttgtggttcgcaggagcaccct
gcgattgccgcctatgccgcgctggatgtgtcggccaccgccgccgcgctgcaagcggcc
caggccgagctcgacgcgctgcagcagcagggcgagcagttgggcgctgcgcatgcggcg
gccctgagccagcagaccagcctgcaagcccaattgacagcggccgagcagcggctggac
gcctggcaacagcgatggcagacactctgcacagccatggcccagcccatcgccgcatcg
gcctggcagcagccgcacacactggccgaggcgcagcaagccagcgccgcgcaagcggcg
cagttgcaacaggccctggcggcagccgaggccgctgagcaagcgctgcaagccgccaag
gatgccgcgcatgcagcagaccagaccctgcaggacgcccagcatgcgcaagcgcgcctg
cagcaggcccagcaagacaacagcagcctgcagcaacgcctgtcgcagaccgtgcaagcg
ctgcaggcccaggcagacgcggccgaggccgccttgcaatccagcctggccccgctgggc
ctggtgattccgcccgccgatggccacgatgcctggctgcagacccgccagcaggaatgg
cagcagtggcagcagcacagcgcgcagctgcaaaccaccgcccagcaactggcactgcag
cagcagcaggcccagcagtgcgcgcaagaggcccagcaatggcagcagcgcctggcgcaa
ctgccggcaccgtcaccagcacaaaccggtgctgcgaccatcgcactgcccgccaccctg
gcggattgcgcggcattgctggaacagacccgccaagaactcgccagcctgcaaggccaa
gcccagcaagcgggccagcaactggccgagcggcagtgggccctggagcaggcccaggcc
gcctggaaccagggcttggaggccagcccctttgccgatgcacaggcttttgcgcatgcg
ctgttgccagcggacgcgctggagcggctcagccagcagcgcgatggcctgcagttggca
ttgcagcgcgccagcacggtggccgaggaaacggcgcagcagcaccaacacctgcaggcc
caggccttgacggaggaggcacccgaggcgctcgcggcgcaattgcgggcgctggaggac
gagcgcaaccagacggcagagcgcatgggcgcccagcgcgcgcgcctggccgatgacgac
cagcgccgcgcggggcagcaggatttgctcgcgcagattgcggcgcaggagcgcgacagc
gcgctgtggcagcggctcgatggcctgatcggatcggccaagggcgacaagttccgcaag
tttgcccagggcctgaccctggaccatttgctggccttggccaacggccatctggccagg
ctgcatggccgctacctgctgcagcgcaagaccactggcgagctcgagctcgatatcgtc
gacagctggcaaggcgatgtcgcgcgcgacacccgcaccttgtcggggggcgaggccttt
ttggtcagtctggcgctggcgctcgcgctgtcggacctggtcagcagcaagacctcgatc
gattcgctgttcctggacgaaggctttggcaccttggacggcgacaccctggagatcgcg
ttgacagcgctcgatacgctgaatgccagcggcaagatgatcggcatcatcagccatgta
gaggcgctcaaggagcgcatcccggcgcagatccgggtggagaagggggcgggaatcgga
tattcgcgtttagagctgcaaggctga
DBGET
integrated database retrieval system