Comamonas squillarum: N4T19_20125
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Entry
N4T19_20125 CDS
T10846
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
csqu Comamonas squillarum
Pathway
csqu03420
Nucleotide excision repair
Brite
Enzymes [BR:
csqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
N4T19_20125
Transcription machinery [BR:
csqu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
N4T19_20125
Chromosome and associated proteins [BR:
csqu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
N4T19_20125
DNA repair and recombination proteins [BR:
csqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
N4T19_20125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UXC17973
LinkDB
All DBs
Position
4404634..4406952
Genome browser
AA seq
772 aa
AA seq
DB search
MSYTVAVRALCEFTARAGDLDLRFTPAPSALEGIEGHGLVRARRGAGYEAELRLAGSFED
LQVRGRADGFDPALGQLEEIKTYRGQIDSVRDNHRALHWAQAKVYGHLLCLERGLPRLKV
ALVYFNVGTQQETVLAEPYSAAELQAFFEQQCRLFLDWARSEAAHRSARDAALAALRFPF
AQFRTGQRALSVAVYRTAQAGLQAGGGSCLMAQAPTGIGKTVATIFPMLKASAQEGLDKL
FFLTAKTTGHRLALHALGLLQTALQGQTGAVPLRVVDLQARDKSCEHPDKACHGESCPLA
QGFYDRLPAARAQALAQEPMLTPDKVRTLALQHQVCPYYLTQELARWSDVVVGDYHYFYD
SAAMLYALTQAHQWKVGVLVDEAHNLLERARRMYTAELPQHTLAAARKAAAGPVKKSLDA
LNRQWNALNKAQHEGGQDYQVYAELPPGLLGAVQRAVAAIAQAQGDSPMLPGDAVLGFYL
EALSWLNLAEQLGPHALFDISLWGSASAGRRGPMSTLCIRNVVPAPHLAARHSAACATVL
FSGTLGPQAFYQDLLGLPPATQWVDVPSPFLAAQLQVQIAGHISTRYQDRAQSLVPIAEV
VAAQFARQPGNYLCFFSSFDYLQRAAECMQRLQPQLPLFCQTSAMDDAGRAAFLARFDEA
GQGIGLAVLGGAFSEGVDLPGNRLIGAFIATLGLPQVNPVNTHMQQAMAQRFGAAKAYDY
TYLYPGLRKVVQAAGRVIRSEDDRGVVVLIDDRFHRAQVRALLPSWWQPQRW
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaccgtggcggtgcgcgccttgtgcgagttcaccgcccgcgcgggcgacctg
gatttgcgctttacgcctgcgccatcggcgctcgaaggcatcgaaggccatggcctggtg
cgtgcccgccggggcgccggctatgaggcagaactgcgcctggcaggcagctttgaagac
ctgcaggtacgcggccgcgccgatggctttgacccggctctgggtcagctcgaagaaatc
aagacctaccggggccagatcgacagcgtgcgcgacaaccaccgcgccttgcactgggcg
caggccaaggtctacggccatctgctgtgcctggagcggggcctgccccgcttgaaggtg
gcgctggtctatttcaacgtgggcacgcagcaggagacggtgctggccgagccgtacagc
gccgccgagctgcaggcattttttgagcagcagtgccgcttgtttttggactgggcgcgc
agcgaggccgcgcaccgcagcgcgcgggatgcggcgctggcggcgctgcgctttccgttt
gcgcagttccgcaccgggcagcgggcgctgtcggtggcggtgtaccgcacggcccaggcg
ggcttgcaggcgggcggcggcagctgtttgatggcgcaggcgcccaccggcattggcaag
accgtggccaccatcttccccatgctcaaggccagtgcgcaagaggggttggacaagctg
ttttttctgaccgccaagaccacaggccaccggctggccttgcatgcgctgggcctgttg
cagacggcgctgcagggccagacgggcgcggtgccgctgcgcgtggtcgacctgcaggcg
cgcgacaaaagctgcgagcacccggacaaggcctgccatggcgaatcctgcccgctggcc
cagggcttttacgaccgcctgcccgccgcccgcgcccaggccctggcgcaagagccgatg
ctgacgcccgacaaggtacgtacgctggcgctgcagcaccaggtctgcccctattacctg
acccaggagctggcgcgctggagcgatgtggttgtgggcgactaccactacttttacgac
agcgccgcgatgctgtatgcgctgacccaggcccaccagtggaaggtgggcgtgctggtg
gacgaggcccacaacctgctcgaacgcgcgcgccgcatgtacacggccgagctgccgcag
cacaccttggcggcggcgcgcaaggcggcggccggcccggtcaagaaatcgctggatgcc
ttgaaccggcaatggaacgcgctgaacaaggcccagcacgagggcgggcaggactaccag
gtctacgccgagctgccgcccggccttctgggtgccgtgcagcgcgccgtggcggccatt
gcccaggcccaaggcgacagccccatgctgccgggcgacgcggtgctgggcttttacctg
gaggcgctgtcctggctgaacctggccgagcagctggggccgcatgcgctgtttgatatc
agcctatggggcagtgcatctgccggccggcgggggccgatgtccacgctctgcatccgc
aatgtcgtgcccgcgccgcacctggccgcgcgccatagcgccgcctgcgccacggtgctg
ttctccggcaccctggggccgcaggccttctaccaggatcttctgggcctgccacctgcc
acgcagtgggtcgatgtgccctcgcccttcctggccgcacagttgcaggtgcagattgcg
ggccatatctccacccgctaccaggaccgggcgcagtcgctcgtgccgattgccgaagtg
gtggcggcgcagtttgcccgccagccgggcaactacctgtgctttttcagcagctttgat
tatttgcagcgcgcggccgaatgcatgcagcgcctgcagccgcagctgccgctgttctgc
cagacctcggccatggacgatgccgggcgcgccgcctttttggcgcgctttgacgaggcc
gggcagggcattggtctggccgtgctgggcggggcgttttcggaaggggtggacctgccg
ggcaaccggctgattggcgcctttattgccaccctgggcctgccccaggtcaaccccgtc
aacacgcatatgcagcaggccatggcccagcgatttggcgccgccaaggcctatgactac
acctacctctacccggggctgcgcaaggtggtgcaggcggccgggcgggtgattcgcagt
gaggacgaccggggcgtggtggtgctgatcgatgaccgctttcaccgcgcccaggtgcgc
gcgctgctgcccagctggtggcagccgcagcggtggtag
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