Comamonas squillarum: N4T19_22985
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Entry
N4T19_22985 CDS
T10846
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
csqu Comamonas squillarum
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csqu03009
]
N4T19_22985 (rimO)
Enzymes [BR:
csqu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
N4T19_22985 (rimO)
Ribosome biogenesis [BR:
csqu03009
]
Prokaryotic type
ribosomal protein modification factors
N4T19_22985 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
UXC18511
LinkDB
All DBs
Position
5068534..5069946
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AA seq
470 aa
AA seq
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MNTDTHAATATLDANRTPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIV
NTCGFIDDAVRESLDTIGEALAENGKVIVTGCLGAKMGDGGGNLVKQMHPSVLAVTGPHA
TQEVMDAVHTNLPKPHDPFIDLVPGSFGEAGIKLTPKHYAYLKISEGCNHRCTFCIIPSM
RGDLVSRPIGDVLKEAKALFAGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLEL
VEALGELAKPHGAWVRLHYVYPYPTVDAILPLMAQGLVLPYLDVPLQHSHPDVLKRMKRP
ASGERNLERIREWRAICPELVIRSTFIAGFPGETEEEFEHLLDFIREAEIDRAGCFAYSP
VEGATANELPGMLPAEVREARRARFMEVAEEVSAKRLERRVGQTMQVLVDKAIGLGKKGG
IARTYADAPEIDGVVHLLPPEKLSKTYKVGELIKVRIVRSQGHDLVGVPV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgatacccacgctgccactgcgacgctcgacgccaaccgaacccccaaggtg
gggttcgtcagtttgggctgccccaaagccctgaccgacagcgagctgatcctgacgcag
ttgagcgccgagggctaccagacctccaagacctttgaaggtgccgatctggtgatcgtc
aacacctgcggctttattgacgatgccgtgcgcgagagcctggacacgattggtgaggcg
ctggccgagaacggcaaggtgatcgtcaccggttgcctgggcgccaagatgggtgacggc
ggcggcaacctggtcaagcagatgcaccccagcgtgctggcggtcacgggcccccacgcg
acgcaagaggtgatggatgcggtccacaccaacctgcccaagccgcatgatcccttcatt
gacctggtgcccggcagctttggcgaggcgggcatcaagctcacgcccaagcactatgcc
tacctgaagatctccgaaggctgcaaccaccgctgcaccttctgcatcatcccctcgatg
cgcggggacctggtcagccgcccgattggtgatgtgctcaaggaagccaaggcgctgttt
gccggtggcgtcaaggagctgctggtgatcagccaggacacctccgcctatggcgtggat
gtgaagtaccgcaccggtttttgggacggcaagccggtcaagacccgcatgctggagctg
gtcgaagcgctgggcgagctggccaagccgcatggcgcctgggtgcgcttgcactatgtg
tacccctacccgacggtggacgcgattttgccgctgatggcccagggcctggtgctgccg
tacctggatgtgccgctgcagcacagccaccccgatgtgctcaagcgcatgaagcgcccg
gccagcggtgagcgcaatctggagcgcatccgcgaatggcgcgcgatctgccctgagctg
gtgatccgctcgacctttattgccggcttccctggcgagaccgaggaagagttcgagcac
ctgctggactttatccgcgaggccgagattgaccgcgcaggctgctttgcctatagcccg
gtggagggcgcgactgccaacgagctgcccggcatgctgcccgctgaggtgcgcgaggcg
cgccgcgcccgctttatggaagtggccgaagaggtctccgccaagcgcctggagcgccgt
gtgggccagaccatgcaggtgctggtggacaaggccatcggcctgggcaagaagggcggt
attgcccgcacctacgccgatgcgcccgagatcgatggcgttgtgcacctgctgccgccc
gagaagctcagcaagacctacaaggtcggcgagctgatcaaggtgcgcattgtgcgcagc
cagggccatgacctggtgggtgtgccggtttaa
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