Clostridium saccharoperbutylacetonicum: Cspa_c00220
Help
Entry
Cspa_c00220 CDS
T02467
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
csr
Clostridium saccharoperbutylacetonicum
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csr03400
]
Cspa_c00220 (addB)
Enzymes [BR:
csr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cspa_c00220 (addB)
DNA repair and recombination proteins [BR:
csr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Cspa_c00220 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
Melibiase
Motif
Other DBs
NCBI-ProteinID:
AGF53858
UniProt:
M1MBN7
LinkDB
All DBs
Position
18652..22128
Genome browser
AA seq
1158 aa
AA seq
DB search
MSIRFIYGRAGTGKSRFCINEIKENIYGENFENKLILLVPEQYTFTTENKILHSIGEKAF
LRTEVLSFKKMTREVFEEYGGRVKEIIKESGKNMLIHRVLNENMDNLTYFKKISKEQGFY
GIISEVISEFKKYNINPQSFQEIDKNIDNVELIKKLKELDVIYEAFNLKMHENYIDGDDE
LTLLSEKLLKCNAYVDSEVWVDEFTTFTPQQLEILKLLAKRCKRVNITLCMDAQPFKDND
KDVTNIFNVTKNTENKILKIMSENNIAYDKPIYLNSSMPYRFKHNSELCHIEKYFFNYPF
NKYFEKCNSIELYKANNIYDEVERVAKSITELVRNKGYRYKDISVVCRNIEDYEKITAVI
FKDYDIPYFLDKKIQLLSNPLIILISSSFEILSKNWSYESVFKYLKSGLTGIDSSYIDIL
ENFILEHGIKGYKWTVDEIISEKWFNNNEDITNEQISIAEVMEEIRRPLIIFHNKINGKH
KVKDMCAAIYEFLIDINAFERIDQWIKNFEEIGLEDKVKEYSQVQSIVIDILDQAVDVIG
EEIIDYFEFFKILNSGFENEEIGVIPIALDQVNIGDVARIKGREVKVLYIVGVNDGVFPA
AKKDEGILSDRDREILSEVGINLAATTRNKVFEEQYILYTALTISSERLILSYPMADFEG
KSLRPSTVIHRTKKIFPKLIEESSIYNLDNTRNKFTKVISPIPTFNELIVAVRRDFDKED
IEAYWPEVYNWFKENQKYKEKVENIFKGLTYSNVGDRVAKKKLRELYQNDMGKLVFSVSR
LEKYAECPFSYFVQYGLKAKNRKIYEFAPPDLGSFVHEMLDSFTNKVKEEGILWSELNNE
KCKEIVSNIIDKKLNSESNSILNSTNKFKYLTKRFKRVISKSVSVIANQIGKGEFEVFKT
EFKFGDYNSGEAITLDLSSDEKVYLQGRIDRIDTLDLDGETYIRVIDYKTGSKKFELNEL
YYGLQMQLLVYLDALIRNSKYILNKQAKPGAILYFKIDDPIIKNNREMELEEIEKEVLNN
LKLKGLILKDARVVRAMDKDIDGYSLIIPAAFKTDGEFKSNSDVITEEEFTLLREYVNKK
MVELCEEMLSGEIKIQPTKRSNKTHCEYCDFSSICQFDTTIKDNKYNVITKKATNDIWKN
IKKDINDLSEEENSDDLI
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagcataagatttatttatggaagagcaggaacaggtaaaagcagattttgtattaat
gaaataaaagaaaacatatatggagaaaattttgaaaacaaattaattttattagtacca
gaacaatatacatttacaactgaaaataaaattttacattcaattggagaaaaggctttt
ttaagaacggaagtgctgagtttcaagaaaatgactcgtgaagtttttgaagaatatgga
ggacgtgttaaagaaataataaaagagtctggaaagaacatgttaattcaccgtgtacta
aatgaaaatatggataatttaacttattttaaaaaaatatctaaggagcaaggattctat
ggaatcatatcagaagtaatttctgaatttaaaaaatataatataaatccacaaagtttt
caagaaatagataagaatatagataatgttgaattgataaaaaaacttaaagaattagat
gtaatttatgaagctttcaatttgaaaatgcatgaaaattatattgatggagatgatgaa
ctaacgttattaagtgaaaaattattgaaatgtaatgcttatgttgattcggaagtatgg
gttgatgaatttactacttttactccccaacagttagaaatattaaaattattagctaag
cgatgtaaaagagttaatataactctctgtatggatgctcaaccattcaaagataatgat
aaagatgtaactaatatatttaatgtaacaaaaaatacagaaaataagatattaaaaata
atgagcgaaaataatatagcttatgataaacctatttatctaaacagttctatgccatat
agatttaaacataacagtgagctttgtcatatagaaaaatacttttttaattatccattt
aataagtattttgaaaaatgtaatagcatagaactttacaaggcaaataatatttatgat
gaagtcgagagagttgctaaaagcatcacagaacttgttagaaataaaggatataggtat
aaagatatatctgttgtatgcagaaatatagaggattatgaaaaaataactgctgtaatt
tttaaagattatgatataccatattttttggataagaaaattcagttattaagtaaccct
ctaattatacttataagttcttcttttgaaattttatctaaaaattggtcttatgagagc
gtatttaaatatttgaaaagtgggttaactgggattgatagttcatatatagatatttta
gaaaactttatattggagcacgggattaaaggatacaaatggactgtggacgaaataatt
tctgaaaaatggtttaataataatgaagatataacgaatgaacaaatatcaattgctgaa
gttatggaggaaataagaaggcctctcattatatttcataataaaataaatggaaagcat
aaagttaaagatatgtgcgcagctatttatgaatttttaattgatataaatgcatttgaa
agaatagatcaatggattaaaaattttgaagaaatagggctagaagataaggttaaagaa
tatagtcaagttcaaagtatagttatagatatattagatcaagcagttgacgtaattgga
gaagagataatagattattttgagttttttaaaatattaaattcaggatttgaaaatgaa
gaaataggagttataccaattgcattagatcaagtaaatattggagatgtagcaagaatc
aaaggaagagaagtgaaagtactttatatagttggagttaatgatggtgtatttcctgct
gctaaaaaggatgaaggaatattatctgatagagatagagaaatattaagtgaagttgga
ataaatttagctgcaacgacaagaaataaggtgtttgaagagcaatatatattatataca
gcattaacaataagcagtgagcgcctaatattatcatacccaatggctgattttgaaggc
aaatctttaagaccatcaacagtcatacatagaacaaagaagatatttcctaagctaata
gaagagagttcaatctataacttagataacacaagaaataaatttacaaaggttatatct
cctattccaacgttcaatgaactcatagttgctgtaaggagagattttgataaagaagat
atagaagcttattggccagaagtttataattggtttaaagaaaatcagaaatataaagag
aaggttgaaaatatttttaagggacttacatattcaaatgtaggtgatagagttgctaaa
aagaagcttagagagctttatcaaaatgatatggggaaactagtatttagtgtttcacga
ttagaaaaatatgctgaatgtcctttttcttattttgttcaatatgggctaaaagcgaaa
aatagaaaaatatatgaatttgcacctccagatctaggatcatttgttcatgaaatgtta
gattcttttactaataaagttaaagaagaaggtatattatggtcagaattaaataatgaa
aaatgtaaagaaatagtatctaatattattgataaaaaattaaattcagaaagtaattca
atattaaatagtacaaataaatttaaatatttaactaaaaggtttaagagagtaatatct
aaatcagtttcagttatagcaaaccaaataggaaaaggcgagtttgaagtatttaagact
gaatttaaatttggagattataattctggggaagctataactttagatctaagttctgat
gaaaaggtatatcttcaaggtagaattgataggatagatacgttagatttagatggagaa
acgtatattagagttatagattataaaactggaagcaaaaaatttgagttaaatgaactc
tattatggtctacagatgcagttattagtatatttagatgcacttattagaaactctaaa
tatattttgaataaacaagcaaaaccaggagctatattatattttaaaatagatgatcct
ataataaaaaacaatagggaaatggaattagaggaaattgaaaaagaggtgttaaataat
ttaaaattaaaaggtttaattttaaaagatgctagagtagttagggcaatggataaagac
attgatggttactcgttaattataccagctgcatttaagactgatggagaatttaagtct
aatagtgatgttattactgaagaggaatttacattgcttagagaatatgttaataaaaag
atggttgaattatgtgaagaaatgttaagtggtgaaataaaaatacagccaactaaaaga
tctaataaaactcattgtgagtattgtgatttttcatctatatgtcaatttgatacaact
ataaaagataacaagtataatgtaataacaaaaaaagcaacaaatgatatttggaaaaat
ataaagaaggatataaatgacttgagtgaagaagaaaattcagatgatttaatttaa
DBGET
integrated database retrieval system
