Clostridium saccharoperbutylacetonicum: Cspa_c02220
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Entry
Cspa_c02220 CDS
T02467
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csr03016
]
Cspa_c02220 (truA)
Enzymes [BR:
csr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Cspa_c02220 (truA)
Transfer RNA biogenesis [BR:
csr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cspa_c02220 (truA)
Prokaryotic type
Cspa_c02220 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AGF54040
UniProt:
M1LMK3
LinkDB
All DBs
Position
212145..212879
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AA seq
244 aa
AA seq
DB search
MRNIKLLIEFDGSNFSGWQRQPKGRTVQNVIEAAISKATGEQIMINGSSRTDAGVHAREM
VANFFTNSTIPGEKFREALNTRLPNDVSIIKSEEVDDSFHARYSSKGKTYSYTIVNREER
LSLGYQYLYQYKYKLDINEMKKACKYFIGSHDFRAFMSPGSSAKTTVRDIKELFIEEDGD
RIKIIITADGFLYNMVRIIVGTLLKVGNGRLNADEIEEIIIEGNRKKAGMCIPPNGLILE
KVFY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatataaaattattaattgaattcgatggaagtaatttctctggatggcaaagg
cagccgaagggacgaacagttcagaatgttattgaggcggccatatcaaaagctacaggg
gaacagattatgattaatgggagttctaggactgatgctggtgttcatgcaagagaaatg
gtagcaaatttttttacaaatagcacaatcccaggagaaaagtttagagaagctttaaat
acaagattacctaatgatgtatctataattaaatcagaagaagttgatgatagttttcat
gctagatattcatctaaaggaaaaacatattcttatacaattgtgaatagagaagaaaga
ttatcattaggatatcaatatctatatcagtataaatataaattggatattaatgaaatg
aaaaaagcatgtaaatattttattggaagccatgattttagagcatttatgtctcctgga
agttctgcaaaaacaactgtacgagatattaaagaactttttatagaagaagatggagac
agaataaaaataatcataacagcagatggatttttatataacatggtaagaataatagta
ggcacattattaaaggtggggaatggcagattaaatgctgatgaaatagaagaaataatt
atagaaggaaatagaaaaaaggctggtatgtgtataccgcctaatggattaatattagaa
aaagttttttattaa
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