Clostridium saccharoperbutylacetonicum: Cspa_c04630
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Entry
Cspa_c04630 CDS
T02467
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr03420
Nucleotide excision repair
csr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cspa_c04630 (pcrA)
03430 Mismatch repair
Cspa_c04630 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csr03400
]
Cspa_c04630 (pcrA)
Enzymes [BR:
csr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cspa_c04630 (pcrA)
DNA repair and recombination proteins [BR:
csr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cspa_c04630 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Cspa_c04630 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
Intein_splicing
UvrD_C_2
AAA_30
DUF5604
AAA_14
GIY-YIG
DEAD
Motif
Other DBs
NCBI-ProteinID:
AGF54281
UniProt:
M1MH80
LinkDB
All DBs
Position
532720..536058
Genome browser
AA seq
1112 aa
AA seq
DB search
MDLKSLLNKEQYEGATTIDGQVLILAGAGSGKTRVLTHRIAHMIEDLNIAPYSILAITFT
NKAAKEMKDRVKALIGEQAENMWISTFHSTCVRILRREIDKIGYKSSFTIYDSSDQKILV
KECMKTLNINDKDITEQEILGKIGKAKDNMQGTRSYMLENEANFREKKIADVYEMYQKRL
KENNALDFDDLIFKTVELFKNNPDVLEFYQNKFKYIMVDEYQDTNGAQYQLVKLLASKYK
NICVVGDDDQCMVEGTLVSAEGKDIKIEELNKDDLIQVAAGNGETCLLPVSEISKRRYSG
DIIRLTTSGGKVIKATPNHLSFGRIVLDDEKYYVYLMYKKNFGYRIGQTSSIRSRKGSEA
SGLAVRLNGEQADKMWVIKACPSKGEASYYEQYYSVKYGIPTMVFNSRGRNITVSQDQIE
RLFKEIDTVSAAERLMDEEYLYKEYPHHLSGAVIRGESIRKRINLSFFGGKKSIQRGLYS
HRIGLNSSGEEFKEKFIEAGFNVRDGKRNTYRVETERALYDEAEEFVKKLSGVEEEFEIL
RKAKLTENNNFMFMPIGSFKEGMSIAVYNNGVIEEDVVASVEIEQYDGYVYDLNINDARN
YIANNVVVHNCIYQWRGADIKNILDFEKDYPGAKVIKLEQNYRSKGNILNAANVVIVNNS
NRKSKVLRTEQEEGNKIKIYRAYADSDEGDFVGKQIQDLKNKQGKNYNDFAILYRTNAQS
RIFEESFRRKGIPYKIVGGTRFYDRKEIKDMLAYLKVLINPQDDISLKRIINVPKRSIGD
ATVSKVQEFAGNFELNLWDAITEVRSIPTLTARNVSTIEPFVELMENLMDLSKTMPVSVL
IEAILKDTGYMKQLQESNEIEDKSRIENLKELVSDAVDFEKSSEDKSLSAYLERVSLVQD
TDKIEEEDDAVVLMTIHSAKGLEFPVVFMVGMENGIFPGMASFEKESEMEESRRLCYVGI
TRAKEILFMTSAEVRRVFGKTVAYSQSDFINEIKPELKEYVGVEKANVMSREKLMNNSYN
NPHSLRNTMSRGNSFSGSNGTSAVSSGVTNEAGSEYITSNEATLGRKVMHEKFGKGTIVS
VQASGSDKKLTVAFDKQGVKTLMLSLAKLKMM
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaatcattacttaataaagaacagtatgaaggggcaactacaattgatggg
caggtacttatattagctggagcaggttctggtaagacaagagttttaactcatagaatt
gctcatatgattgaggacttaaatattgcgccatatagtatattagctatcacttttaca
aataaggctgcaaaggaaatgaaggatagagttaaggctcttattggtgaacaggctgaa
aacatgtggatatccactttccattcaacatgtgttaggattttaagaagagaaatagat
aagataggctacaaaagcagctttacaatatatgatagttcagaccaaaaaatattagta
aaagagtgtatgaaaactttaaatattaatgataaggatataactgagcaagagatatta
ggaaagataggaaaagcaaaggataatatgcaagggactcgaagctatatgttagaaaat
gaagctaactttagggaaaagaaaattgcagatgtctacgaaatgtatcaaaaaaggctg
aaggaaaacaatgccttagattttgatgatcttatatttaaaactgttgaattgttcaaa
aataatcctgatgttttagaattttatcaaaataaatttaagtatattatggtggatgaa
tatcaagatacaaatggagcacaatatcaattggtaaaattgcttgcttcaaaatataag
aacatatgtgttgtgggcgatgatgatcaatgtatggttgaaggaacattagtatcagca
gagggtaaggatataaaaatagaagaattaaataaagatgatttgattcaagttgctgca
ggaaatggagaaacatgtttattgcctgttagtgagataagcaagagaagatattcaggt
gacataataaggctaactacaagcggcggaaaagtgataaaggcaactccaaatcattta
tcttttggaagaatagtattagatgatgaaaaatattatgtatatttaatgtataagaaa
aattttggctacagaataggtcaaacttcttcgataagaagcagaaaaggcagtgaagct
agtgggttagcagtaagactaaatggagaacaggcagataagatgtgggtaataaaggct
tgtccttcaaaaggagaagcatcttattatgaacaatattattctgttaaatatggaata
ccaacaatggtattcaactcaagaggcaggaatataactgtttctcaagatcagatagag
agattatttaaagaaattgatactgtatctgctgcagaaagattaatggacgaagaatat
ttatataaggaatatcctcatcacttaagtggtgcagtaataagaggcgaatcaattaga
aaaagaattaatttaagcttttttggaggaaagaaatctattcaaagaggactttattct
cataggataggattaaattcttcaggagaagagtttaaagaaaaattcatagaagctgga
tttaatgttagagatggtaagagaaacacatatagagtggagacagaacgagctttatat
gatgaagcagaagaatttgtgaaaaagttaagcggggtagaagaagagtttgaaatacta
agaaaagcaaaacttacagaaaataataactttatgtttatgcctattggaagttttaaa
gaaggcatgtctattgctgtatataataatggagtaattgaagaagatgttgtagcttct
gttgagatagaacaatatgatggttatgtttatgatttaaatatcaacgacgcaaggaat
tacattgctaataatgttgtggttcataattgtatttatcaatggagaggtgctgatatt
aaaaatatactagacttcgaaaaagattatccaggagcaaaggtaataaaattagagcaa
aattatagatctaagggtaacatattaaatgctgcaaatgttgtaattgttaataactca
aacagaaagagtaaagtactaagaactgaacaagaagaaggaaataagataaagatatat
agagcttatgcagatagtgatgaaggtgattttgttggaaaacaaattcaagaccttaag
aataagcaaggtaaaaactataatgattttgctattctatatagaacaaatgctcaatcg
agaatttttgaagaaagttttagaagaaaaggaatcccttataaaattgtagggggtaca
agattctatgatagaaaagaaataaaagatatgttagcatatttaaaagttcttattaac
ccgcaagatgatattagtcttaaaagaattataaatgtacctaagagaagcattggagat
gcaactgtatctaaggttcaagaattcgcaggtaattttgaacttaatttatgggatgca
ataactgaagttagaagcattccaacccttacagctagaaatgtttcaacaatagaacca
tttgtggagcttatggaaaatctgatggatttaagtaaaacaatgcctgtatcagtatta
attgaagctattttgaaagatactggatatatgaagcaattacaagaatcaaatgagatt
gaagataagagtagaattgaaaacttaaaggaattagtatctgatgctgttgactttgaa
aagagcagtgaagataaatctttatctgcatatttagaaagagtttctttagttcaagat
actgataaaattgaagaagaggatgatgcagttgtccttatgacaattcatagtgcaaag
ggattagaatttccagttgtatttatggtaggtatggaaaatggaatattcccaggaatg
gcatcctttgaaaaagaatctgagatggaagaatcaagaagattgtgttatgttggtata
actagagctaaagaaatattgtttatgacatcagctgaagttagaagagtgtttggaaaa
actgtagcgtattctcaatcagattttataaatgaaataaaaccagaacttaaggaatat
gtaggtgtagaaaaggcgaatgttatgagtagagagaaattaatgaataactcatacaat
aatccacacagcttaagaaatactatgagcagaggaaatagtttttcaggaagcaatgga
acaagtgcagttagtagtggtgttactaatgaagctggctcagaatatataacaagtaat
gaagcaacccttggtagaaaagtaatgcatgaaaaatttggcaaaggaactattgtttca
gttcaagcttcaggtagtgataagaaactgacagtagcttttgataagcaaggtgttaaa
acattaatgctatctttggcaaaattaaaaatgatgtag
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