Clostridium saccharoperbutylacetonicum: Cspa_c10610
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Entry
Cspa_c10610 CDS
T02467
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
csr
Clostridium saccharoperbutylacetonicum
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csr03400
]
Cspa_c10610 (sbcC)
DNA repair and recombination proteins [BR:
csr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cspa_c10610 (sbcC)
Archaeal homologous recombinant proteins
Cspa_c10610 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
RuvB_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AGF54837
UniProt:
M1MTE7
LinkDB
All DBs
Position
1175798..1179286
Genome browser
AA seq
1162 aa
AA seq
DB search
MRPVRLKIRGLNSFIDEQTIDFDKLTDRGFFGIFGPTGSGKSTILDGITLALYGNLARKS
SNFINTNCDRLNVNFEFQISGSETRKYIIDREFRRKKDGSINSGKCKIVDITDSEEVLAD
SVKNMNKKVEEIIGLNLEDFTRTVVLPQGKFSEFLKLEGKDRRDMLERLFNLEQFGDNLT
RKLNTKISKERTENSVLIGQLSVYSDISDEKLKEKQAELQLTILNLENLKKELDNIEKNY
KENEELWKLQLELLEYKNKEKLLKEKEEEINKDIEKIRLGEAGEKVIPYIKAYENTKKEF
TKNEVEFQDLKVKIEKIKEEQENIEKSWNEIKDKKENKLPQLMIQEEKIKNAIEEKKLLE
KILAEINMLMTHIEEVKIKLEKGQKDLIEIENEIKIKDKEIKEDEKRYDEIKIDELIKEK
VQEGILCEEKISSLKNNISKDTEKKAKIEKENDDIIASGKALKETIEEATKELEEKLNQH
EYLLNNPPGEQKDLLNLKQVILENEQNWSNFNKFTNEIAASKKEIVKLNTEIEKIQMEEA
KNNQELEELKAKEKEIMTENIAHTLRMELKDGEACPVCGAIHHIKENIKVLSATDISLIE
NKIKEKEEFIKVVNNNIIENQTKVITLNEKISNNESEIINIGSEFKEKTLEKLQEEFINL
EKALENYNKDKEGLDKIINELKNNINIKNGEINELRAVVRTNMKQLKELEENIKVNTQEF
NELNNNVNLLKSETLITNFIEKNEEIKAVEKERERLAKKIKENRVAIENLENRKEKLNNE
VISIKELLVKYNADLAAYEKNRDEKLLAIRSKVSEESNLDNMLSEVQENIKNINEEFFSA
QKNKDRIQKEFTDNNEKLIDVGSKYKELIKRKKDEEAQLEVSIDSEGFKSLEEVKANLIE
KEEINKYKEKIDDYRENLSKVKGTIESLLNKIDGKTLNEEDYTKVKLLKEQKEIEFSSVN
ENKIKVDEELKKIKIKLNEQRELFEKKNKLEHKLALLGDLEKLFKGKKFVEFVAINKLKY
ISIEASKRLREITHGNYGLEVDENGKFMIRDYKNGGAERDSSTLSGGETFIASLSLALAL
SAQIQLKGTAPLELFFLDEGFGTLDDELLEVVMGSLERIHNEKLKVGIISHVEAIKNRVP
IKLMITPAECGMGGSKVRIERS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtaagattgaagattagaggattaaacagttttatagatgagcagactata
gactttgataaattaactgatagaggtttttttggcatttttggaccaacaggtagtggg
aaatcaacaattttagatggaataactttagcgttatatggaaacttggctagaaaaagt
tctaactttataaatacaaattgtgataggttaaatgttaattttgaatttcaaatatca
gggagtgaaactagaaaatatattattgatagagaatttagaaggaaaaaagatggaagt
ataaattctggaaaatgtaaaattgttgatataacagattcagaagaagttttggcagat
agcgttaagaatatgaataagaaagttgaagaaataataggtcttaatttagaggatttt
acaagaacggttgtattgccacaaggtaaatttagtgagtttttaaaacttgaaggtaaa
gacagacgggatatgttagaaaggctatttaatttagaacaatttggagataatttaaca
agaaaattaaacactaaaataagtaaagaaagaacagaaaacagtgttttaattggtcag
ctaagtgtttatagtgacataagtgatgaaaagttaaaggaaaaacaagctgagttacag
ttgactatacttaatttagaaaatttaaaaaaggaattagataacattgagaagaattac
aaagaaaatgaagaattatggaaattacaattagaattgttggaatataagaataaggaa
aaacttctaaaggaaaaagaagaagaaataaataaggatatagaaaaaataagactagga
gaagctggagaaaaagttataccctatataaaagcctacgaaaatactaaaaaggaattt
accaaaaatgaagtagaatttcaggacctaaaggtaaagattgaaaagattaaagaagaa
caagaaaatatagaaaaatcatggaatgaaataaaagataagaaggaaaataaactccca
caactaatgatacaagaagaaaaaattaaaaatgcaattgaagaaaaaaagttattagaa
aaaatattagctgaaataaatatgttaatgacacatattgaagaagttaaaatcaaattg
gaaaaaggacagaaagatcttattgaaatagaaaatgaaattaaaataaaggataaggaa
atcaaagaggatgaaaagagatatgatgaaataaaaattgatgaacttatcaaggaaaag
gtacaagaaggaatactttgtgaagaaaaaatcagcagtttaaaaaataatattagtaag
gatacagaaaagaaagctaaaattgagaaagaaaatgatgatattatagcaagtggtaaa
gccttaaaagaaacaattgaggaagctacaaaagaattagaagaaaaattaaatcaacat
gaatatttacttaataatccgccaggagaacaaaaagatttattaaatttaaaacaggtc
atacttgaaaatgaacaaaattggtcaaattttaataaattcactaatgaaatagctgcg
tcaaagaaagaaatagtaaaattaaatactgaaattgaaaagattcaaatggaagaggca
aagaataatcaagaattagaagagttaaaagcaaaagaaaaggagattatgacagaaaat
attgctcatactcttagaatggaactgaaagatggagaagcatgcccagtatgtggagct
attcatcatattaaagaaaacataaaagttttgtcagcaacagatatcagtttaattgaa
aataaaattaaagaaaaagaagagtttattaaagttgttaataataatattatcgaaaat
caaacaaaggttattactttaaatgagaaaatttctaataatgaaagtgaaataattaat
attggaagtgaatttaaagaaaaaactttagaaaagcttcaagaagaatttataaatctg
gaaaaagctttggagaattataataaggataaagaaggtttagataaaattattaatgaa
cttaaaaataatattaatattaagaatggagaaataaatgaacttagagctgtggtaaga
actaatatgaaacagcttaaggaattagaggaaaatattaaagttaatactcaagagttt
aacgaattaaataataatgtgaatttgttaaagtctgaaactttaataacgaattttatt
gaaaaaaatgaagaaattaaggcggttgagaaagaaagagaaagattagcaaaaaagatt
aaggaaaatagagtagcaattgaaaatttagaaaatagaaaagaaaaattaaataatgag
gttatttctataaaagaactattggttaaatataatgctgacttagcagcatacgaaaaa
aatagagatgaaaaacttttggctataagaagtaaagtcagtgaagaaagtaacttagat
aacatgcttagtgaagtacaagaaaatataaaaaatataaatgaagaattttttagtgct
caaaaaaacaaagatagaatacagaaggaatttacggataataatgaaaagcttattgat
gtaggcagcaaatataaagaattaatcaagagaaagaaagatgaagaagcacaattggaa
gtttcaatagatagtgagggttttaagtctttagaagaggtaaaagcaaatctgatagaa
aaggaagaaattaataagtataaagaaaaaatagatgattatagagaaaatttatcaaag
gtaaagggaacaattgaaagtttacttaataagattgatggtaagacgttgaatgaagaa
gactatacaaaagttaaattattaaaagaacaaaaggaaatagagtttagttcagttaat
gaaaataagataaaagttgacgaagaactaaaaaaaataaaaattaaacttaatgagcaa
agggaactttttgaaaaaaagaataagttggaacacaaattagctttactcggagattta
gaaaagttatttaaaggaaagaaatttgttgaatttgtagctatcaataagttgaaatat
atttcaattgaagcttctaaaaggttgagagaaattacccatggaaattatggattagaa
gtagatgagaatggtaagtttatgattagggattataagaatggtggagcagaaagggat
tcatctactttatcaggtggagaaactttcatagcatcactatctttagcacttgctttg
tcggcacagatccaattaaagggaacagcaccattagaattgtttttccttgatgaaggc
tttggaactttggatgatgaattgcttgaagttgttatgggttcattagaaaggattcat
aatgaaaaattaaaggttggaataataagtcatgtagaagctataaaaaatagagtacca
attaagcttatgattacaccggcagaatgtggaatgggtggaagtaaagttagaattgaa
agaagttag
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