Clostridium saccharoperbutylacetonicum: Cspa_c12330
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Entry
Cspa_c12330 CDS
T02467
Symbol
rfbB2
Name
(GenBank) dTDP-glucose 4,6-dehydratase RfbB
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr00521
Streptomycin biosynthesis
csr00523
Polyketide sugar unit biosynthesis
csr00525
Acarbose and validamycin biosynthesis
csr00541
Biosynthesis of various nucleotide sugars
csr01100
Metabolic pathways
csr01110
Biosynthesis of secondary metabolites
csr01250
Biosynthesis of nucleotide sugars
Module
csr_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Cspa_c12330 (rfbB2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Cspa_c12330 (rfbB2)
01055 Biosynthesis of vancomycin group antibiotics
Cspa_c12330 (rfbB2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Cspa_c12330 (rfbB2)
00525 Acarbose and validamycin biosynthesis
Cspa_c12330 (rfbB2)
Enzymes [BR:
csr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Cspa_c12330 (rfbB2)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
KR
Motif
Other DBs
NCBI-ProteinID:
AGF55005
UniProt:
M1LQ40
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All DBs
Position
1362357..1363406
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AA seq
349 aa
AA seq
DB search
MKIYLVTGGAGFIGSNFILYMLTKYKDIKIINLDKLTYAGNLENLKSIENDKRYTFVQGD
ICDKDLVSSLFKINNINYVVHFAAESHVDRSIKEPEIFAKTNVLGTVNMLNCAKTAWGSE
EGFIDGVKFLHVSTDEVYGSLGDEGFFVETTPIDPHSPYSSSKASSDLMVKSYYDTYKMP
VNITRCSNNYGPFQFPEKLIPLLINNCLQHKDLPVYGDGLNIRDWLFVEDHAKAIDMVIN
GGRLGEVYNVGGHNERINIQIVKTVIEYINKNVDKNVTESLIKYIEDRKGHDRRYGIAPD
KIKTELGWYPETSFEVGIKKTIKWYLDNSKWMKNVTSGEYQKYYDKMYN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatatttagttacaggtggagcaggatttataggttcgaatttcattttatat
atgttaacaaaatataaagatattaaaataataaatttagataagttaacttatgcagga
aacttagagaatcttaaatctattgaaaatgataagagatatacatttgttcaaggagat
atttgtgataaagatttagtttcaagtctttttaaaattaataatataaattatgttgtt
cattttgcagcagaatctcatgttgacagaagtataaaagagccggaaatatttgctaaa
acaaatgtattaggaactgtaaatatgctcaattgtgcaaaaactgcttggggaagtgaa
gagggatttattgatggagtgaaatttcttcatgtatcaacagatgaagtttatggttct
ttaggagatgaaggcttttttgtggaaacaacaccaatagatcctcatagtccatattca
tcaagcaaagcaagttcagacttaatggttaaatcttattatgatacttataaaatgcca
gttaatataacaagatgttcaaataactatggaccatttcaatttccggagaagttaata
ccattattaatcaataactgtttgcagcataaagatcttcctgtatatggagatggatta
aatataagagattggttgtttgtagaagaccatgcaaaagcgattgatatggttattaat
ggaggtagacttggagaagtctataatgttggaggccataatgaaaggataaatatacaa
atagtaaagacagtaattgaatatataaataaaaatgtagataaaaatgttactgaaagt
ttaataaaatatattgaagatagaaaaggtcatgatagaagatatggaatagctcccgat
aagataaagacagaacttggctggtatccagaaactagttttgaagttgggattaagaag
actattaagtggtatttagataattcaaaatggatgaaaaatgtaacttctggagaatat
caaaagtattatgataagatgtacaactaa
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