Clostridium saccharoperbutylacetonicum: Cspa_c12810
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Entry
Cspa_c12810 CDS
T02467
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cspa_c12810 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csr03400
]
Cspa_c12810 (priA)
Enzymes [BR:
csr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cspa_c12810 (priA)
DNA repair and recombination proteins [BR:
csr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cspa_c12810 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
Zn_Ribbon_YjdM
AAA_30
SLFN-g3_helicase
T2SSE
Zn_Ribbon_TF
TrwB_AAD_bind
Zn_ribbon_PF0610
DUF1258
Motif
Other DBs
NCBI-ProteinID:
AGF55053
UniProt:
M1MF97
LinkDB
All DBs
Position
1412613..1414808
Genome browser
AA seq
731 aa
AA seq
DB search
MYAEIIINSDALDIDKLFTYKIPYEFQERIDIGFRVKLPFGPKNKPIEGFVFSILRDTSI
KFDYKVKEILTLCDKEAMLTKNDIEIIKFMRKKYLCRYIDAIRLMIPVGIMKGSKEKTKK
VIYINKEIDDQELNKENYINLYNFILDNDGIFSKAEITSNKQFSLYSLNKLIEKNIFRVE
EQVVFRYNVRQYETDSSKKLTEEQSDCLNKILSGTNLKYLIKGVTGSGKTEVYMRLVEEM
LNEGKSAVVLVPEISLTPQMIERFKGRFGENVALFHSRLSDGERFDEWYRIKEGKAKLAI
GARSALFLPFQDLGLIIIDEEHENTYKSEHNPKYQAREVSEFICELKKCKLVLGSATPNI
ESYYRAINGEYELIHMNKRVNGKRMPFMKIVDMREELKNKNLSLFSKTLLNELDETLKNK
KQAILFLNRRGYSTFISCRSCGYVFKCPECDVSMTYHKNGYLICHYCGRAEQVQKVCPKC
NSKYVKFFGAGTERVELEVKKFFPKARILRMDVDTTRFKNAHESIYNSFKNGEADILIGT
QMVSKGLDFKNVTLVGVLAADMSLNLPDYRAAERTYQIITQVAGRAGRGEDEGKVIVQSY
TPNHYSLNYAMEEDYKSLFDEEIKLRRLMGNPPFGKILLINCNSKSEEKLKNFMYILADN
LKKIVSEDLTMLGPVPCIITKIKENYRWQIIIKGIFNDEFGEKVKDMLYILNKSVYNEIR
VSIDVNPNNMT
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctgaaataattattaatagtgatgcattagatatagataagttatttacatat
aaaataccttatgaatttcaagaaagaattgatataggttttagagttaagcttcctttt
gggcctaaaaacaaacctatagaaggatttgttttttctatattaagagatacttcaatt
aaatttgattacaaagtgaaagaaattttaactttatgtgataaggaagctatgttaact
aaaaatgatatagaaataattaaatttatgagaaaaaaatatctttgtagatacattgat
gcaattcgtcttatgattcctgttggaattatgaaggggtcaaaggaaaaaacgaaaaag
gttatatatattaataaagaaatagatgatcaagaattaaataaagaaaattatataaat
ttatataattttatacttgataacgatgggattttttctaaagctgaaattacaagcaat
aaacaattttccttatactctttaaataaactcatagaaaagaatatttttagagttgaa
gagcaagtggtctttagatataacgttcgccaatatgaaactgatagcagtaaaaaatta
actgaagagcaaagtgactgcctaaataagattttaagtggaacaaatttaaaatatctt
attaaaggtgttacaggatcaggaaagacagaagtatatatgagattggttgaggaaatg
ttaaatgaaggtaagagtgcagtagttttagttccagaaatttcattaacgcctcaaatg
attgaaagatttaaaggacgttttggagaaaatgtagcattgtttcatagtagattaagt
gatggtgaacgatttgatgagtggtatagaattaaagaaggaaaagctaaattagctatt
ggtgcaagaagtgctttgtttttgccatttcaagatcttggacttataataattgatgaa
gaacatgaaaatacatataaatcagaacataatcccaagtatcaggctagagaagtaagt
gaattcatatgtgaattaaaaaaatgtaagttggtattaggttcagctactccgaatatt
gaaagctattacagggctattaatggagaatatgaattaattcatatgaataaaagagta
aatgggaaaagaatgccatttatgaaaatagtagatatgagagaagaacttaagaataaa
aatctttctttatttagtaagacattattgaatgaacttgatgagaccttaaagaataaa
aaacaggctattttatttttaaataggagagggtattcgacttttatttcatgtagaagc
tgtgggtatgtatttaagtgcccagaatgtgatgtttcaatgacatatcataagaatggt
tatttaatatgccattattgtgggagggctgaacaagtacagaaggtttgtcccaaatgc
aatagtaaatatgtgaaattttttggagcaggaacagaaagagttgaattagaagtaaag
aaattttttcctaaagcaagaattttaagaatggatgttgatacgactaggtttaagaat
gcacatgaatctatctacaattcatttaaaaatggtgaagcagacattttgattggtact
caaatggtatcaaaaggactagactttaaaaatgttacattagtaggagttttagctgcc
gatatgtctttaaatttacctgattatagagctgctgaaagaacgtatcaaataataact
caagtagcaggtagggcaggaagaggagaagacgaaggaaaagtaattgttcaaagttat
accccaaaccattatagtttgaattatgctatggaagaagactataaatcgttatttgat
gaagaaataaaacttagaaggttgatgggtaatccaccttttggtaaaatattattaatt
aattgtaattcgaaatcagaagaaaaattaaaaaactttatgtatattttagctgataac
ttgaaaaaaatagtatcagaggatttaacaatgttaggtccagttccttgtattattacg
aagataaaagaaaattatagatggcagataataattaaaggaatttttaatgatgagttt
ggagaaaaagtaaaagatatgctttatatattaaataagagtgtatataatgaaataagg
gttagtatagatgttaatcctaataatatgacatag
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