Clostridium saccharoperbutylacetonicum: Cspa_c13430
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Entry
Cspa_c13430 CDS
T02467
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csr03016
]
Cspa_c13430 (truB)
Enzymes [BR:
csr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Cspa_c13430 (truB)
Transfer RNA biogenesis [BR:
csr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cspa_c13430 (truB)
Prokaryotic type
Cspa_c13430 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGF55115
UniProt:
M1LQG1
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All DBs
Position
1473942..1474817
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AA seq
291 aa
AA seq
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MNGVLNIFKNRGMTSFDVVRKIKSLANEKKVGHTGTLDPEATGVLPVCLGRATKTIDYIM
NSNKVYEVKFLLGIKTTTYDLEGEVIDKNDTKHLNEDEVSKVIMSFVGEYDQVPPMYSAL
KKDGVRLYELARQGIEIEREARKINIFNISDLNFELPYVFMRVECSKGTYIRSLCYDIGE
KLKVGAAMTELNRAATSVFKQENSINIDDLTKENIEDYIITIEEALAFYPKLTVKSTFTK
LLVNGVKVFDKRLTNEKREKNVLYRVYDTEATFIGIGKQDEDGFKIEKLLL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgtattaaacatatttaaaaatagaggaatgacatcttttgatgtagttagg
aaaataaaaagtttagctaatgaaaagaaagttggtcacactggtacacttgatcctgaa
gcaacaggagtgttaccagtatgtctaggaagagccactaaaactattgattatataatg
aatagtaataaagtatatgaagttaaatttttgcttggaattaaaacaactacatatgat
ttagagggtgaagtaatagacaaaaatgataccaaacatcttaatgaggatgaggtttca
aaggtaattatgtcttttgttggagaatatgatcaagtaccaccaatgtattctgcactt
aagaaagatggagtaaggctttatgaattagcaagacaaggaattgaaattgaaagagaa
gcaagaaagattaatatttttaatatatctgacttgaattttgaactcccttatgttttc
atgagggttgaatgttcaaagggaacgtatattagaagtttgtgttatgatattggagaa
aaattaaaagttggggctgcaatgacagaattaaatagagctgcgacctctgtttttaag
caagagaacagtataaatatagatgatttaactaaagaaaatatagaagattatattatt
acaattgaagaagctcttgcattttatccaaaattaacagttaaaagtacatttactaaa
ttgcttgtaaatggtgttaaagtatttgataagcgattaacaaatgaaaaaagagaaaaa
aatgttttgtatagagtatatgatactgaagctacttttataggtatcggaaagcaagac
gaagatggatttaaaattgaaaaattattgctttag
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