Clostridium saccharoperbutylacetonicum: Cspa_c13460
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Entry
Cspa_c13460 CDS
T02467
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase Pnp
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cspa_c13460 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csr03019
]
Cspa_c13460 (pnp)
03016 Transfer RNA biogenesis [BR:
csr03016
]
Cspa_c13460 (pnp)
Enzymes [BR:
csr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Cspa_c13460 (pnp)
Messenger RNA biogenesis [BR:
csr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cspa_c13460 (pnp)
Transfer RNA biogenesis [BR:
csr03016
]
Prokaryotic type
tRNA degradation factors
Cspa_c13460 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
KH_2
S1_RRP5
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
AGF55118
UniProt:
M1MFG5
LinkDB
All DBs
Position
1476390..1478495
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AA seq
701 aa
AA seq
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MNNVLTTEIAGRELKVEFGKVGMLSNAATFTSYGDTVILTNVNASPEPRTGIDFFPLSVE
YEERLYAVGKIPGGFIKREGRPSEKAILNGRAVDRTIRPLFPKGYRNDVQVVTTVVSVEK
DNLPEILAINAASLALCLSSIPYTIPTAAVQVGIIDGKFITNPDTEGREKSTLHLTVCAT
KERVMMIEAGGQEIPEDKMIDAIKYGFDECQKIIAFQEEAMAKFGKKKDEPVLYAVDPEI
EKEVKEFAQDMVKDAMYIMDKDERNAAIDLVYEKVTEEFAEKYPDNMGDIKEILYTMQKK
VVRHMLLKEKRRPDGRAFDQVRPLGCEVGILPRTHGTGLFTRGLTQVMTVATLGSISEIQ
ILDGIDEAQSKRYMHHYNFPGYSVGEVKPLRGPGRREIGHGALAERALEPLIPSEEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLITSEDLSEEAVLTDI
QGIEDFFGDMDFKVAGTTEGITSIQVDTKLQGFSFNVVENAIRDARKARLTIIDKINECM
SAPREDVSLYAPKTQIMNINPDKIRDVIGAGGKVINKIIQDTGVKIDIKEDGTVFVSSTD
HEGVKEALKIIDGLTKEVKAGEVYLGKVTKITTFGAFVEILPSKEGLVHISKLANERVNK
VEDVVSIGDEILVKVTEIDNQGRINLSRKDALLDNENKDEK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgttctaacgactgaaatcgctggaagagaattaaaagttgagttcggaaaa
gtgggtatgttatcaaatgccgcaacatttactagttatggagatacagtgattttaact
aatgttaatgcatcgccagaaccaagaacaggtatagacttttttccgttaagtgttgaa
tatgaagaaagactatatgcagtaggaaaaattccgggtggatttattaaaagagaagga
aggccatcggaaaaagcaatattaaatggtagagctgttgatagaacaataagacctcta
tttcctaaaggatacagaaatgatgttcaagtagttactacagttgtatcagtagaaaag
gataatttaccagaaattttagcaattaatgcagcatcactagcattatgtctttcaagc
attccttatacaatcccaacagcagcagtacaagtaggaattatagatggaaaatttatt
acaaacccggatacagaaggacgtgaaaaaagtacccttcatttaacagtatgtgctact
aaagaaagagtaatgatgattgaagctggtggtcaagaaataccagaagataaaatgata
gatgctattaaatatggcttcgatgaatgccaaaagattatagcattccaagaagaagct
atggctaaattcggcaagaagaaggatgaaccagtattatatgctgtagatccagaaata
gaaaaagaagttaaagaatttgcacaagatatggttaaagatgcaatgtatataatggat
aaagatgaaagaaatgcagctatagatcttgtgtatgaaaaagttactgaagagtttgct
gaaaaatatcctgataatatgggtgatattaaagaaattctatacactatgcagaaaaaa
gttgtaagacatatgcttttaaaagaaaagagaagaccagatggaagagcttttgatcaa
gtaagacctctaggttgcgaagttggtattttaccaagaacacatggaacaggattgttt
acaagaggattaactcaagtaatgactgtagcaacattaggatcaataagtgaaattcaa
atattagatggaatagatgaagcgcaatcaaagagatatatgcatcactataacttccca
ggatatagtgttggtgaagtaaaacctttaagaggacctggaagaagggaaattggtcat
ggagctttagcagaaagagcgcttgaaccattaattccttcagaagaagagttcccttat
acaattagattagtatctgaagttttaagttctaatggatccacttcgcaagcatcagtt
tgtggttcaacactagcattattagatgcaggtgtgccaattaagagaccagctgcaggt
attgcaatgggacttatcacatcagaagatttatcagaagaagcagtattaacagatatt
caaggaatagaagatttctttggagacatggattttaaagtggctggaacaacagaaggt
ataacttctattcaagttgatacaaaacttcaagggtttagttttaacgtagttgaaaat
gcaattagagatgcaagaaaagcaagacttactataatagataaaattaatgaatgtatg
tctgctccaagagaagatgtttcattatatgcgccaaagacacaaataatgaacataaat
cctgataaaataagagatgttattggagctggaggaaaagtaattaataaaataattcag
gatacaggcgttaagattgacataaaagaagacggaactgtatttgtaagctcaactgac
catgaaggtgttaaagaagctcttaagataatagatggcttaacaaaagaagtaaaagct
ggtgaagtttatttaggtaaagttactaaaataactacatttggagcatttgtagagatc
ttacctagcaaggaaggattagttcatatttctaagttagcaaatgaaagagtaaataaa
gtagaagatgtagtttctattggagacgaaattcttgtaaaggtaacagaaattgataat
caaggaagaattaatctttcaagaaaagatgctttattagataatgaaaataaagatgaa
aagtaa
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