Clostridium saccharoperbutylacetonicum: Cspa_c13520
Help
Entry
Cspa_c13520 CDS
T02467
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csr03009
]
Cspa_c13520 (rimO)
Enzymes [BR:
csr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Cspa_c13520 (rimO)
Ribosome biogenesis [BR:
csr03009
]
Prokaryotic type
ribosomal protein modification factors
Cspa_c13520 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
DUF5600
Motif
Other DBs
NCBI-ProteinID:
AGF55124
UniProt:
M1MAZ7
LinkDB
All DBs
Position
1484877..1486271
Genome browser
AA seq
464 aa
AA seq
DB search
MNQSKIEIINEQERNDNILNKYKVGMVSLGCDKNRVDSEIILGKMSDEYVITNDPKNADI
IIVNTCGFIESAKQESIDTILEMADYKLNYKCKLLIATGCLTQRYGDELGKLIPEIDIML
GVNDYNKINELITDFIEGNKLASELLNYSDENINEGKRILTTQKESAYIRIAEGCNNFCT
YCIIPKIRGKFRSRSMENIINEAKDLSENGVQEIILIAQDTTLYGNDIYGKKSLHLLLKE
LSKIEKIKWIRVLYCYPEEIYEELIDEIANNEKVVKYLDLPIQHISDKILKLMGRKTTKQ
DILNKINKLREKISDIVLRTTFIVGFPNEGEEEFNEIIDFVKEYKLEKVGVFTYSQEEDT
PAAKMSGQVLEEIKKKREEQLMLVQRDISEEINKLKIGKIYDILVEGYDGNKYCGRSYEM
APNIDGNVFFESDKNINIGKFVKVKIVKNMDYDLVGVVVNEPCK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcaaagtaaaatagaaataataaacgagcaagaaagaaatgataatattttaaat
aaatataaagttggaatggtgagtttaggctgtgataaaaatagagttgactctgagata
atactaggcaagatgagtgatgagtatgtaatcacaaatgatcctaaaaatgcagatata
attattgtaaatacatgtggatttatagaaagtgcaaaacaagagtctattgatacaatt
ttagaaatggcagattataaattaaattataaatgtaaattgcttattgctacaggatgt
ttaacacaaaggtatggtgatgaattaggaaagttaatacctgaaattgatataatgctt
ggagtaaatgattataacaaaataaatgaattaattacagattttatagaaggaaataag
ctggcttcagaacttttaaattattcagatgagaatattaatgaggggaaaagaattctt
acaactcaaaaagaaagtgcatatattagaattgcagaaggttgtaataatttttgtaca
tattgcataattcctaaaataagaggaaaatttagaagtagaagcatggaaaacattata
aatgaagcaaaagatttaagtgaaaatggagtacaagaaataatattaatagctcaagat
acaacattatatggtaatgatatttatggaaagaaaagtcttcacttattactgaaagaa
ttatctaaaatagaaaaaattaagtggattagggttttgtattgttatccagaagaaata
tatgaagaactaattgatgaaattgctaataatgagaaggtagtaaaatatctagatttg
ccaattcaacacataagtgataaaattctaaaacttatgggaagaaaaactactaagcaa
gatatattaaataaaataaataaattaagagaaaaaatttcagatattgttttaagaact
acttttatagttggtttcccaaatgaaggggaagaagaattcaatgaaataatagacttt
gttaaggagtataagcttgaaaaggtaggtgtgttcacttattcacaagaagaagataca
ccagctgcaaagatgagtggtcaagttttagaagaaataaagaaaaaaagagaagagcaa
ttaatgttggtacaaagagatatttcagaagaaataaataaattgaaaattgggaaaata
tatgatattcttgttgagggatatgatggaaataaatattgtggaagaagttatgaaatg
gctcctaatatagatggaaatgtgttctttgaatcagataagaatattaatattggtaaa
ttcgtaaaagtaaaaatagttaaaaatatggattatgatttggtaggagttgttgtcaat
gaaccttgcaaataa
DBGET
integrated database retrieval system
