Clostridium saccharoperbutylacetonicum: Cspa_c16120
Help
Entry
Cspa_c16120 CDS
T02467
Symbol
pel
Name
(GenBank) pectate trisaccharide-lyase Pel
Organism
csr
Clostridium saccharoperbutylacetonicum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
HMBD
Motif
Other DBs
NCBI-ProteinID:
AGF55382
UniProt:
M1MV42
LinkDB
All DBs
Position
1776119..1777924
Genome browser
AA seq
601 aa
AA seq
DB search
MKRELKKSKQMKKDFKLFSQRVALATLASSVVMSSTFITSASASTLSGNKSATTASDAKT
AETTNNLSMATRTTLAAVSVVNNSVSILDSEGWLESASVEWSPVEEAIGYNVYYKAANGA
DSTYKQLDNQLIRKYQSYFRADVLGLAQGNYVIKIVPIINNQEASSSQAITKTLKVDTNT
REGFAFSKQSPMGTGSGGYKDDGTVASNAKILYITAGNVNTVTADVVTNAKGTKTTCTGI
VNILAARQKGYDKTPLIIRMVGEIKGSDINGLNSSGYLQLKGCYNVTLEGVGEDATVYGW
GILVRNAHNVEVRNLGIMMFPDDGVSLDTDNENIWVHNNDFFYGAPGSDADQVKGDGSCD
IKQTSTYVTVSYNHFHDSGKCSLCGMSDTNNFFVTYHHNWFDHSDSRHPRIRVGSVHVYN
NYFDGNSKYGVGVTKGASVFVEGNYFRNCKYPMLSSLQGSDIYENPKGGFSGEAGGIIKA
YNNQIVGETRLVYANQDANQFDAYLASSRNEAVSSTYKTVSGGNTYNNFDTASSMYSYTP
DSPEAAKDKVTAYAGRVDGGDFKWTFTDADDADHSINAELKDKIVNYTSDLVAVGGNSVS
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagaattaaaaaaaagcaaacaaatgaaaaaagatttcaaattattttcacaa
agagtagcattagctactttagcgtcttcagtggttatgtcatcaacatttattactagt
gctagtgctagtacattaagtggaaataaaagtgctactaccgcaagtgatgcaaaaacg
gcagaaactacaaacaatttaagtatggctacaagaactactttagcagcagtatctgta
gtaaataattcagtatctatattagatagtgaagggtggttagaatcagcaagcgtagaa
tggagtcctgttgaagaggctattggatataatgtttattacaaagcagcaaatggagca
gattctacatataaacaattagacaatcaattaattagaaaatatcaatcatattttaga
gctgatgtattaggtttagcacaaggaaattatgtgataaaaatagtccctattataaat
aatcaagaagcttcttcctcacaagcaatcacaaaaactcttaaagtagatacaaataca
agagaaggttttgcattttcaaaacaatcaccaatgggtacaggttctggtggatataag
gatgatggtactgtagcaagtaatgcaaaaatattatatattacagcaggcaatgtaaat
acagtaacagcagatgttgtaacaaatgctaagggaactaaaactacttgtactggtatc
gttaatattttagcagcacgtcaaaagggttatgataaaactccacttattattcgtatg
gtaggagaaattaaaggctctgatattaatggacttaacagttctggatatttacaatta
aaaggctgttataatgtaacgcttgaaggcgtaggagaagatgctacagtttatggatgg
ggaatacttgttagaaatgctcataatgtagaagttagaaatcttggaattatgatgttc
ccagatgatggtgtttcacttgatactgataatgaaaatatatgggtccataataatgac
tttttctatggagcacctggaagtgatgcagatcaagtaaaaggagatggatcttgtgat
ataaaacaaacttcaacttatgttacagtatcatataatcatttccatgattcgggtaaa
tgttcactttgtggaatgtcagatacaaacaatttctttgtaacctatcatcataattgg
tttgatcattctgactcaagacatccacgtattagggttggttctgttcacgtgtacaat
aattattttgatggtaattcaaaatatggagttggtgttacaaaaggtgcttctgttttt
gtagaaggtaactattttagaaattgcaaatatccaatgttaagttcattacaaggcagc
gatatttatgaaaatcctaaaggaggcttttcaggagaagcaggtggaataattaaagca
tataataatcaaattgtaggagaaacaagacttgtttatgctaatcaggatgctaatcaa
tttgatgcgtatttagcttcgtcaagaaatgaagcagtttcaagcacctacaagacagta
agtggaggaaatacttataacaactttgatacagcttcaagtatgtattcatatacacca
gactcaccagaagcagcaaaagataaagttactgcttatgcaggaagagtagatggtgga
gatttcaaatggacatttacagatgcagatgatgctgatcattcaataaatgctgaatta
aaggataagattgtgaattatacatctgacttagtagctgttggaggaaactcagtaagt
aaataa
DBGET
integrated database retrieval system
