Clostridium saccharoperbutylacetonicum: Cspa_c26240
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Entry
Cspa_c26240 CDS
T02467
Symbol
spoVD1
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr00550
Peptidoglycan biosynthesis
csr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Cspa_c26240 (spoVD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csr01011
]
Cspa_c26240 (spoVD1)
Peptidoglycan biosynthesis and degradation proteins [BR:
csr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Cspa_c26240 (spoVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
PBP_dimer_2
YonK
Motif
Other DBs
NCBI-ProteinID:
AGF56389
UniProt:
M1MEP6
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All DBs
Position
2878924..2881188
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AA seq
754 aa
AA seq
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MRRENYKDRSKMRQRMSLVAFALTFVFSILILRLSYIMIVKRSDYAARAEEQWTSEVKID
ARRGRILDRNGKELAVSANVYRVDFDLTSIRNYLKRSLKEIPAKELEHMKSVGIPVPTGN
EGLKNDDIAPAIAKALDVEVSVIKDKLETKLKNGEPAGAAIVKRRVEKDIADKVKELNIS
GVIVSPDTKRYYPNGNFLAHVLGSTNTDNKGLTGIELQYNSYLAGIPGMKVAELTKNNMD
YPYTISQFTSPVNGKDITLTIDENIQKFAEKAAQQAFEDTEAKAVSILVMDPKTGEVLAM
VNKPDFDPNNPYQGADKFDGANSGEKLQKMWRNRLVNDTFEPGSIFKVITAITGLEENVV
NKDTDFQCNGSLSVGGINPKCWKAGGHGAQKFPDIIQNSCNVGFMKLGAMIGKDKLCEYI
NKFGFGQASGIDLPGEAKGIVKAVNKVSEADLATIAFGQTNTVNSVQYMTAFNAVANGGT
LIQPHVMKEITHNDDNNASIVDDSFKPKTTTVASKEKTAELRSYLERVVTGGSGTGTFIE
GYHIGGKTGTAQKVVNGVYGDGKYISSFVGMAPVDDPKVTIMVTIDEPTKNGAYYAAQVA
VPPAKTLFLDIFNYLNSKFSDENLGQITRDVTIPEVRNMKVADAKKVLKDAKLDFNIEGD
GENITGITPYPGYSVKEGSKINLYTNSEGTYNNNVVMPDVRGYSKEDASALLKNIGIVAT
FEGDGAVSEQDISQGEVISKGSTVKLILSSDYKD
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
ttgagaagggaaaattataaagataggtcaaaaatgcgacagaggatgagcttagttgct
tttgctttgacttttgtgttttccatactgattcttagactttcatatataatgatagtt
aaaaggtcagattatgcagcaagagcagaagaacaatggacaagtgaagttaagattgac
gcaagaagaggaagaatattagatagaaatggtaaagaactcgcagtttctgctaatgtt
tatagagtggattttgatttgacatctatcagaaattatttaaaaagatccttaaaagaa
ataccagccaaggaacttgaacatatgaaaagtgtggggattcctgtgccaacaggaaat
gaagggttaaagaacgatgatattgcacctgcgatagcaaaagcattagatgtagaggtt
tcagtaataaaagataaacttgaaactaaacttaaaaatggagaacctgctggagcagca
atagtaaaaagaagagtagaaaaagatatagctgataaagtgaaggaactaaatattagc
ggtgtaattgtttctcctgatacaaagagatactatccaaatggaaattttttagcacac
gtattgggaagtactaatacagataataaaggattaactggtatagaacttcaatataat
tcatatttagcaggaattcctggtatgaaagtagcagaacttactaagaataatatggat
tatccatatacaatatctcagtttacttcacctgtaaatggtaaagatataactcttaca
attgatgaaaatatccaaaaattcgctgaaaaagcagcacagcaagcatttgaagatact
gaagctaaagctgtatctatattagttatggatcctaagacaggagaagtattagcaatg
gttaataagcctgattttgatcctaacaatccatatcaaggtgcagacaaatttgatgga
gcaaatagtggagaaaaattacaaaaaatgtggagaaatcgattggttaatgatacattt
gaacctggatcaatatttaaagtaattacagccattactggtttagaggaaaatgtggtt
aataaagatacagattttcaatgtaatggatcattatcagtaggaggaattaatccaaag
tgttggaaagctggcgggcatggagcacaaaagtttccagatataattcaaaattcatgt
aatgtaggttttatgaaattaggtgcaatgattggtaaagacaagttatgtgaatacatt
aataaatttggatttggacaagcaagtggcattgatttaccaggtgaagctaagggaatc
gtgaaggcagttaataaggtctcagaggcagatcttgcaacaattgcttttggacaaaca
aacactgttaattcagttcaatatatgactgcttttaatgctgttgcaaatggggggaca
ttaattcagcctcatgtaatgaaggaaataacacataatgacgacaataatgcaagtata
gtagatgattcctttaaacctaaaaccacaactgtagcaagtaaagaaaagactgcagag
cttagatcttaccttgaacgagttgttacaggtggatctggcacaggaacttttatagaa
ggatatcatattggtggtaaaacaggaacagcacaaaaagtagtaaatggtgtatatgga
gatggtaaatatatatcttcatttgttgggatggctcctgtagatgatcctaaagttaca
atcatggtaactattgatgaaccaactaaaaatggggcatattatgcagctcaagtagca
gtgccaccagcaaaaacattatttttagatatttttaattatctaaatagtaaattttca
gatgaaaatttaggacagatcactagggatgtaacaatacctgaagttagaaatatgaaa
gttgctgatgcaaaaaaagtattaaaagatgctaagctagactttaatattgaaggggat
ggagaaaacattacaggtataacaccatatccaggctattctgtaaaagaagggtcaaaa
ataaatctttacacaaatagtgaagggacttataataataatgttgtaatgccagatgtt
agaggatattcaaaggaagatgcttctgctttattaaaaaatattggaatcgtggctact
tttgaaggtgatggagcagtttcggaacaagatatttcccaaggggaagttataagcaaa
ggaagcactgttaaattaatcttaagttccgattataaagattag
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