Clostridium saccharoperbutylacetonicum: Cspa_c26460
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Entry
Cspa_c26460 CDS
T02467
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr00300
Lysine biosynthesis
csr00470
D-Amino acid metabolism
csr01100
Metabolic pathways
csr01110
Biosynthesis of secondary metabolites
csr01120
Microbial metabolism in diverse environments
csr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Cspa_c26460 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Cspa_c26460 (dapF)
Enzymes [BR:
csr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Cspa_c26460 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF4396
Big_11
Motif
Other DBs
NCBI-ProteinID:
AGF56411
UniProt:
M1MNV7
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Position
2902607..2903434
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AA seq
275 aa
AA seq
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MDFYKMQGIGNDFVFIEDFNNEIQEECELAKKVCDRHFGIGADGLVIVRKSDLANAKMVI
INADGSRASMCGNAIRCFGKYVYEHKIVKDLKFSVETGDGVKEIEIILEKDKVKYVRVYM
GKPSYAGADIPLVNMENLIGKEITVDGKTYKMTTVLMGVPHTIIFQENEEYDVIADGSKL
EKLPMFKEGSNINFVKIIDKTHIRVDTWERGAGATLACGTGCSASVVVAKKFGLVDNIEE
IFVKAPGGELVIEVLGDDVHMKGPAEVVFQGKITI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggatttttataaaatgcagggaataggaaatgactttgtatttattgaagattttaat
aatgaaattcaagaggaatgtgaacttgcaaaaaaagtttgcgatagacattttggaatt
ggtgcagatggacttgtaattgtaagaaaatcagatttagctaatgctaaaatggttata
ataaatgctgatggttcaagggcaagcatgtgtggtaacgcaataagatgttttggaaaa
tatgtatatgagcataaaatagttaaagacttgaaattctcagtagaaactggtgatgga
gtaaaggaaattgaaataattttagaaaaagataaagttaaatatgtacgtgtatatatg
ggaaaaccatcttatgcaggagcggatatacctttagttaatatggaaaatcttattgga
aaagaaattactgtagatggcaaaacttataagatgacaacagtattaatgggtgttcct
catacgattatttttcaggaaaatgaggaatatgatgttatagctgatggttcgaaatta
gaaaaattacctatgtttaaagaaggtagtaatataaactttgttaaaataattgataag
acgcatataagagtagatacatgggaaagaggtgctggagctacccttgcttgtggtact
ggttgtagtgcatctgtagttgtagctaagaaatttggtcttgtagataatattgaagaa
atttttgtgaaagcaccaggtggagagctagttatagaagttttaggtgacgatgtacat
atgaaaggtccagctgaagttgtatttcagggaaagattacgatatag
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