Clostridium saccharoperbutylacetonicum: Cspa_c27470
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Entry
Cspa_c27470 CDS
T02467
Symbol
ispA
Name
(GenBank) farnesyl diphosphate synthase IspA
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr00900
Terpenoid backbone biosynthesis
csr01100
Metabolic pathways
csr01110
Biosynthesis of secondary metabolites
Module
csr_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Cspa_c27470 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csr01006
]
Cspa_c27470 (ispA)
Enzymes [BR:
csr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Cspa_c27470 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Cspa_c27470 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
Cspa_c27470 (ispA)
Prenyltransferases [BR:
csr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Cspa_c27470 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF3180
Motif
Other DBs
NCBI-ProteinID:
AGF56512
UniProt:
M1MYM4
LinkDB
All DBs
Position
2972816..2973691
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AA seq
291 aa
AA seq
DB search
MEMEINNLKQDIDSYLKDYFINKGTYNKVIYDSCSYSLNIGGKRIRPILLALTYYIYKEN
YNKVIPMAAAIEMIHTYSLIHDDLPCMDDDDLRRGQPTNHIKFQENIAVLAGDALLNEAM
IIMMKFALENKENSLLAAHEIAAAAGAEGMIGGQVVDIVSEGKEISKDELEYMHAKKTGA
LIKASIVAGAILADAPKDDLEMFEKYGEKLGLVFQIKDDILDVVGDKNKLGKNTHADEEH
NKTNFISVFGLEKCIDLCESLTEECITILNNLSVNAEYLVNLTYNLLNREN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagataaataatctaaagcaagatatcgatagttatttaaaagattacttt
ataaataaaggtacatacaataaagttatatatgattcgtgcagctatagtttaaatata
ggaggaaaacgaataagacctatattgttagctttaacttattatatatacaaagaaaat
tataataaagttattccaatggcagctgcaattgagatgatacatacttattcattgatt
catgatgatttaccatgtatggatgatgatgatttacgaaggggtcaacctacaaatcat
ataaaatttcaagaaaatattgcagtacttgcaggtgatgcattattaaatgaagctatg
ataattatgatgaaatttgctttggaaaataaagaaaattcattattagcagcccatgaa
atagctgctgctgctggagcagaaggtatgataggtggtcaggttgttgatattgtttca
gaaggaaaagaaatttctaaagatgagttagaatatatgcatgcaaaaaaaacaggtgct
ctcattaaagcatcaatagttgcaggcgctattttagcagatgcaccaaaagatgacttg
gaaatgtttgaaaagtatggagagaagcttggtttagtatttcaaataaaagatgatatt
ttagacgttgttggtgataagaataagctaggaaaaaatacacatgcagatgaagagcat
aataaaaccaattttatatcagtttttggattagaaaagtgtattgatttatgtgaatca
ttaactgaagaatgtataacaattcttaataatttaagtgttaatgctgaatacttagta
aatttaacgtataatcttttaaatagagaaaattaa
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