Clostridium saccharoperbutylacetonicum: Cspa_c28360
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Entry
Cspa_c28360 CDS
T02467
Symbol
dacB1
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacB
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr00550
Peptidoglycan biosynthesis
csr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Cspa_c28360 (dacB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csr01002
]
Cspa_c28360 (dacB1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csr01011
]
Cspa_c28360 (dacB1)
Enzymes [BR:
csr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Cspa_c28360 (dacB1)
Peptidases and inhibitors [BR:
csr01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Cspa_c28360 (dacB1)
Peptidoglycan biosynthesis and degradation proteins [BR:
csr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Cspa_c28360 (dacB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Transpeptidase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AGF56599
UniProt:
M1MFA5
LinkDB
All DBs
Position
3069449..3070303
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AA seq
284 aa
AA seq
DB search
MQKGIKSIAIILFSLIFIQSLSLNVYAENITGTNFKVNARSAIALDKETGTILFEQNAYE
LVPMASTTKILTSLIAIEQGNLDKKVTISKKAASIRGSRVGYKAGEEIVLKELIFGLMFK
SGNDAAIAIAEELGGSIEGFSEIMNHYARGIGILDSHFESPHGLDSSNHYSTAYDLAMLT
SKGMDYDLFREIVGTKQISKEKYNFTRDYNNINKILWMIPGANGVKTGYTGQAGKCLVSS
VNNNGKDIIIVVLNCPDRWKVTDKIYNHVLEKVAFGSNTVKELV
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaggtattaagagtattgctattatattattcagccttatttttattcagtca
ttaagcctaaatgtatatgcagaaaacataactggtactaattttaaggtaaatgcaagg
tcagcaatagctttagataaagaaactggcactattttatttgaacaaaatgcatatgag
ttagttccaatggcaagcacaacaaaaattcttacgtcacttattgctattgaacaagga
aatttggataaaaaagttactataagcaagaaagcagcaagtattagaggatcaagagtt
ggttataaggctggagaggaaattgtattaaaagaactaatatttggtcttatgtttaaa
tcaggcaatgatgcggctattgctattgctgaagaattgggaggttccattgagggattt
tcagaaataatgaaccattatgcaaggggaataggaatattagattcgcacttcgaatct
ccacatggattggacagtagtaatcattattctactgcttatgatttggcgatgcttaca
tcaaagggaatggattatgatttgtttagagaaatagtaggtactaaacaaatttctaaa
gaaaaatataattttacaagagattataataatataaacaaaattctttggatgattcca
ggggctaatggagttaagacagggtatacaggtcaagctgggaaatgcttagtatcatca
gttaataacaatggaaaagatattattatagttgtgttaaattgccctgatagatggaaa
gttacagataaaatctacaatcatgtgttagaaaaagtagcctttggaagtaatactgtt
aaagaattagtataa
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