Clostridium saccharoperbutylacetonicum: Cspa_c30050
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Entry
Cspa_c30050 CDS
T02467
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr03030
DNA replication
csr03430
Mismatch repair
csr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cspa_c30050 (polC)
03430 Mismatch repair
Cspa_c30050 (polC)
03440 Homologous recombination
Cspa_c30050 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csr03032
]
Cspa_c30050 (polC)
03400 DNA repair and recombination proteins [BR:
csr03400
]
Cspa_c30050 (polC)
Enzymes [BR:
csr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cspa_c30050 (polC)
DNA replication proteins [BR:
csr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cspa_c30050 (polC)
DNA repair and recombination proteins [BR:
csr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cspa_c30050 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
DNA_pol3_a_NI
RNase_H_2
Rv2179c-like
tRNA_anti-codon
DEDDh_C
Zn_ribbon_8
YhfH
Motif
Other DBs
NCBI-ProteinID:
AGF56766
UniProt:
M1MPX5
LinkDB
All DBs
Position
3279150..3283538
Genome browser
AA seq
1462 aa
AA seq
DB search
MQHAKYFKRGLMISMKRVNEAFSEYESRGNLNTAIIESVVLRKKTKILEMEISSDNYIEL
NEIESFNNFIKQRFSLNDSKIRVKYTDAANIKPIEEELENIICSLSNKYPALKSVVNNCE
YEVIDKNINFNLRIPVSGFLKTMDYDKKINSVLKIMYGKQYDIKFIDTISGEEIAKMTEE
KRANEMMYIKKEIKNTQSIASPPPEAPKKIEEVKTDSKAEGDVKKNTLLIMGRNANIKEP
VIKINDITPDEGRIALEGEISNLEAKELRSGKMLISFDLYDGTNSMTCKAFCKPGEYDEV
FSRIKKAKGLRLAGNAGYSNFSHETEFIANTIVEAEGMRRYKRMDNSEMKRVELHMHTQM
SQMDAMSSASDLIKRAMSWGMKSIAITDHGVVQSFPEAHKLLGRDNKDMKVIYGVEAYLA
PDKKPSVTNSKGQRIDTTYCVLDLETTGFSPRTEKITEIGIMKIKDGKILDKFSTFVNPQ
KPIPMRVVEVTKITDDMVSSAETIEKVFPKMLEFIEGSVLVAHNAEFDINFLKHNAKVLG
YDFDFTYVDTLPLAQDVFPDFKSYKLGRIAKNLGIKVEVAHRALDDVDTTVKVFNIMLEI
LKERGAESVEEIDLYAADEDAQKVAYKKVRTYHAIILAKDYVGLKNLYKLVSYSHLDYFY
KKPRILKSMFEKYSEGLILGSACSEGELFQAILLGRSDEQIEEIAKFYDYLEIQPLGNND
YLVRQEQVPSREYLKDINKKIVTLAEKLNKPVVGTGDVHFLDPEDEIYRRILEAGQGFKD
ADQQAPLYLRTTEEMLEEFSYLGRDKAYEVVVTNTNKIADMCEQISPISPEKCPPHIDGC
EQTIKDIAYDKAHELYGDPLPEIVQARLDKELDSIIKNGFSVMYIIAQKLVWKSNEDGYL
VGSRGSVGSSFVANMTGITEVNSLPPHYRCAKCKYSDFEDYGVLNGFDLPDKVCPVCGEN
LHKDGIDIPFETFLGFNGDKEPDIDLNFSGEYQAKAHRYTEVIFGKGTTFKAGTIGTIAE
KTAFGYVKKYFEEKNIPVNKAETMRIALGCTGIKRTTGQHPGGIIVVPKGREIFEFCPVQ
HPADDPNSDIITTHFDYHSIDQNLLKLDILGHDDPTVIRMLQDLTGVDPKDIPMDDKETM
SLFYSTKALGVTPDQINSEVGTFGIPEFGTKFVRGMLVDTKPKTFSDLLCISGLSHGTDV
WLGNAKDLIDNGVITSISDAVCTRDDIMVYLIKKGLPPNTAFKIMETVRKGKALKEPKWP
EYEALMRSNEVPEWYIESCKKIKYMFPKAHAAAYVMMAFRIAWFKVHIPRAYYATYFSIR
AKAFDAEFMIFGKEKVKAKMQEINAMGNDAGPKDKDMYDDLEIVLEMYERGIKFLPIDLY
KSHATRFQVEESGIRPSLNSIAGMGNVAAEGIANAAKEKEFNSVDDVKKRSKIGNAGIEL
LRKFDCLKGLPESDQMCFFDVV
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatgctaaatattttaaaagagggttaatgattagtatgaagagagtaaatgaa
gcttttagtgagtatgaatcacgtggaaacttaaatacagcaattatagaatcagtagtt
ttgcgtaagaaaacaaaaatattagaaatggaaataagttctgataactatatagaattg
aatgaaattgagagttttaataatttcattaagcaaagattttctttaaatgattcgaag
attcgcgttaaatatactgatgcagcaaatataaagcctatagaagaagaattagaaaat
attatatgttctttgtctaataaatatcctgcattaaagtcagttgtaaataattgtgaa
tatgaggttattgataaaaatattaactttaatttgagaattccagtatcaggttttcta
aaaactatggattatgataaaaaaattaatagtgttttaaaaattatgtatggaaagcaa
tatgatattaaatttattgacacaataagtggtgaagaaattgctaaaatgacagaagaa
aaacgtgcaaatgaaatgatgtatatcaaaaaagagatcaaaaatacacaaagtattgct
tcaccacctcctgaagcacctaaaaaaattgaggaagttaaaactgattcaaaggcagaa
ggtgatgttaagaaaaacacattattaattatgggaagaaacgctaatataaaggaacct
gtaattaaaattaatgacattacaccagatgagggacgaatagctttagaaggtgaaata
tctaatttagaagctaaagaacttagaagtggaaagatgctgatttcttttgatttatac
gatggaacaaattcaatgacttgtaaagccttctgtaaaccaggtgaatatgatgaggta
ttctctagaataaaaaaagctaagggacttaggcttgcaggaaatgcaggttatagtaat
ttttctcatgaaactgaatttattgctaacacaatagttgaagcagaaggaatgagaaga
tataagagaatggataattcagagatgaagagagtagaacttcatatgcatactcaaatg
agtcagatggatgcaatgagcagcgcttctgatctaataaaaagagctatgagttgggga
atgaagtcaatagctataactgaccatggagttgttcagtcctttccggaagcccataag
cttcttggaagagataataaagatatgaaggttatttatggggttgaagcatatttagca
ccagataagaaaccttcagtaactaattcaaaagggcagagaatagatactacatattgt
gttttagatttagaaactacaggtttttcaccacgaacagaaaaaattactgaaataggt
attatgaaaattaaagatggaaaaatattagataaattcagcacttttgtaaacccacaa
aagccaattccaatgagagttgttgaagtaactaaaataactgatgatatggtaagcagt
gcagaaaccatagaaaaggtatttcctaaaatgcttgagtttattgaaggaagtgtatta
gttgcacataatgctgaatttgatattaatttcttaaagcacaatgcaaaagtactgggt
tatgactttgatttcacttatgttgatactttgcctttagcacaagatgtttttcctgac
tttaagtcttataaattaggaagaattgcaaaaaacttaggtataaaggttgaagttgct
catagagctctagatgatgtagacacaacagttaaggtatttaatataatgcttgaaata
cttaaggaaagaggagcagaaagtgttgaagagatagatttatatgctgctgatgaagat
gctcaaaaagtagcttataagaaggtaaggacttatcatgcaataatactagcaaaggat
tatgttggtttaaagaatttatataagctcgtatcttattcacacttggactacttttat
aaaaaaccacgtatactaaaaagtatgtttgaaaaatattctgaaggtctaatacttgga
agtgcttgtagtgaaggtgagttatttcaagctatcttattaggtagatctgatgagcaa
attgaagaaattgcaaaattctatgattatttagaaattcaacctttaggaaataatgat
tatttagtgagacaagagcaagttcctagcagggaatatttaaaagacattaataagaaa
attgtgactttagcagaaaaattaaataaacctgtagttggaacaggagatgttcacttc
ttagatccagaggatgaaatttatagacgtattttagaggcaggtcaaggatttaaggat
gcagatcaacaagctccattgtatttaagaactacagaagaaatgcttgaggaattttcg
tatttaggaagagataaggcatatgaagtagtagttacaaatacaaataagatagctgat
atgtgtgaacaaatcagccctatttcaccagaaaaatgtcctccacatattgatggctgt
gaacaaactattaaagatatagcttatgataaagctcatgagttatatggggatccacta
ccagaaattgttcaggcaagacttgataaagaattagattccattattaaaaatggattt
tcagttatgtatataattgcacaaaagttggtttggaaatcaaatgaagatggatatcta
gtaggttctagaggatctgttggttcttcttttgttgctaatatgactggtattacagaa
gttaattcgttaccacctcactatagatgtgcaaaatgtaagtactcagattttgaggat
tacggtgttttaaatggttttgacttaccagataaagtatgtccagtttgtggtgagaat
cttcacaaggatggaatagatataccatttgaaacctttttgggatttaatggagataaa
gaaccagatatagatttaaacttctcaggagaatatcaagcaaaagctcataggtataca
gaagttatttttggtaaaggtactacctttaaggcaggaacaataggtactattgcagaa
aaaactgcttttggttatgtcaaaaagtattttgaagaaaaaaatattcctgttaataaa
gcagagacaatgagaattgctttaggttgtacaggtattaaaagaactacaggacagcat
ccaggtggaataatagttgtacctaagggacgtgaaatttttgaattttgtccagttcag
catcctgctgatgaccctaattcagatattatcacaacacattttgattatcactcaatt
gatcaaaatcttttgaagcttgatatcttaggccacgacgatcctactgttattagaatg
cttcaggatttaacaggagtagatcctaaggatatacctatggatgataaggaaacaatg
tcattattttattcaacaaaggctcttggtgttactccagatcaaattaattcagaagta
ggaacctttggtattcctgaatttggtactaaatttgttagaggaatgcttgtagatact
aaacctaaaactttctctgacttattatgtatttcaggactttctcatggtacagatgta
tggcttggaaatgctaaggacttaatcgataatggagtaattacaagcataagtgatgcg
gtatgtacaagagatgatattatggtatatttaattaaaaaaggtctccctcctaatact
gcttttaaaataatggaaactgttcgtaaaggaaaggcattaaaagaacctaagtggcca
gaatatgaagcattaatgagatctaatgaagtaccagaatggtatatagaatcatgtaaa
aaaataaaatacatgtttccaaaggctcatgctgctgcttatgtaatgatggcatttaga
atcgcttggtttaaggttcatatacctagagcttattatgcaacatattttagtatcaga
gcaaaagcttttgatgcagaatttatgatctttggtaaagaaaaagttaaagcaaagatg
caagaaataaatgctatgggtaatgatgcaggccctaaagataaagatatgtatgatgat
ctagaaatagtattagaaatgtatgaaagaggtattaaattccttccaatagatttatac
aaatcacatgctacaagatttcaagttgaagaaagtggaataagaccttcacttaacagt
atagctggaatgggaaatgtagcagctgagggaattgctaatgcggctaaagaaaaagaa
tttaactctgtagatgatgtaaagaagcgttctaaaattggtaatgctggtatagagtta
cttagaaagtttgattgtttaaagggtcttccagaaagtgatcaaatgtgtttctttgat
gtagtttaa
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