Clostridium saccharoperbutylacetonicum: Cspa_c48540
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Entry
Cspa_c48540 CDS
T02467
Symbol
xylB4
Name
(GenBank) xylosidase/arabinosidase XylB
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr00520
Amino sugar and nucleotide sugar metabolism
csr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
Cspa_c48540 (xylB4)
Enzymes [BR:
csr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
Cspa_c48540 (xylB4)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
AGF58607
UniProt:
M1N595
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Position
complement(5344689..5346236)
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AA seq
515 aa
AA seq
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MSKIKNPIISGFYPDPSICAVGEDFYLATSTFAYFPGVPIFHSRDLINWEQIGNILNRKS
QLNLEGVGHSRGIFAPTLRYHNGTYYLITTNVSHGDNFIVTAEKPEGPWSDPYWLEGAEG
IDPSLFFDDDGKAYYVGTRPNPDGVRYNGDWEDWVQELDLNTMCLIGESHKIWKGAMRDV
IWPEGPHLYKKDGYYYLMIAEGGTGPEHCVTIARSKSIFGKYEGCPRNPIITHRHLGKNY
PIKHVGHGDLVKTQGDKWFMVMLASRTCEGYCNTGREPFLAKVIWEEGWPVVNPGVGILE
LEQEHELLEYKVEPKEACYHFYGKALDTSFVFLRNPSESLYSLTDKEGCLRLYLKEQSLK
DLDNPAYIGIRQKDYYYMVSTMMEFNPVKEKESAGIAVVQSNEYHMRYECIKDKGKNILQ
IVECIKGEDVLISKEEICPGKLYLKIVSNGQNLTFYYGNDGINFKVLQENVNSKNLSTEV
AGGFVGCTIGMYASSNGNPTNNYADFYWFEYKNTR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaataaaaaatccaattatatctggattctatccagacccatcaatatgtgca
gtgggagaagatttttatttagcaacatctacctttgcatattttcctggagtcccaata
tttcatagtagggatttgattaattgggaacaaattggaaatatattgaatagaaaatcg
caactaaatttagaaggagtaggtcattctcgaggaatatttgctccaacattacgttat
cacaatggaacatattatttaattactacaaatgtatcgcatggagataattttattgta
actgcagaaaaaccagaaggaccatggtctgatccatattggctagaaggagcagaaggt
attgatccaagcttattctttgatgatgatggaaaggcttattatgtagggacaagacca
aatccagatggcgtacgttataatggggattgggaagactgggttcaagaattagactta
aatactatgtgtcttataggtgaaagtcataaaatatggaaaggtgcgatgagggatgta
atttggcctgaaggacctcatctttataaaaaagacggttattattatttgatgattgca
gaaggagggacaggccctgagcactgtgttactattgcaagaagtaaatctatatttgga
aagtatgaaggctgtccacgtaatcctattattactcatagacatttaggaaaaaattat
ccaataaagcatgttggacatggagacttagtgaaaacacaaggtgataaatggtttatg
gtaatgctagcaagtagaacctgtgagggctattgtaatactggaagagaacccttttta
gctaaagtaatatgggaagagggttggccagtagtaaatcctggtgttggaatattagaa
cttgagcaggaacatgaacttttagaatataaagtagaaccaaaagaagcctgttatcat
ttctatggaaaggcgttagatacttcttttgtatttttgagaaatccaagtgaaagttta
tattccttaacagacaaggaaggctgcttaagactgtacctaaaagaacaatcattaaaa
gacttagacaatccagcctatataggaattagacaaaaagattattattacatggtgtct
actatgatggaatttaatccggtcaaggagaaagagagtgctggaattgcagtagttcaa
agtaatgaatatcatatgagatatgaatgtattaaggataaaggaaaaaatatacttcaa
attgttgaatgtattaagggagaagacgttttaatttcaaaagaagaaatttgtcctggc
aaattgtatttaaaaatagttagcaatggtcagaatttaactttttattatggaaatgat
ggaattaattttaaggtattacaagaaaatgttaacagtaaaaatttgagtacagaagta
gctggaggctttgtaggctgtacaataggaatgtatgcaagcagcaatggtaatcctact
aataattatgcagatttctattggtttgaatataaaaatacaagataa
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