Clostridium saccharoperbutylacetonicum: Cspa_c51850
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Entry
Cspa_c51850 CDS
T02467
Symbol
dacB2
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacB
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr00550
Peptidoglycan biosynthesis
csr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Cspa_c51850 (dacB2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csr01002
]
Cspa_c51850 (dacB2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csr01011
]
Cspa_c51850 (dacB2)
Enzymes [BR:
csr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Cspa_c51850 (dacB2)
Peptidases and inhibitors [BR:
csr01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Cspa_c51850 (dacB2)
Peptidoglycan biosynthesis and degradation proteins [BR:
csr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Cspa_c51850 (dacB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Transpeptidase
Peptidase_S13
Beta-lactamase
RVP_2
Motif
Other DBs
NCBI-ProteinID:
AGF58936
UniProt:
M1MWF9
LinkDB
All DBs
Position
5734691..5735920
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AA seq
409 aa
AA seq
DB search
MKRILKRINILFLFLFCFVYTTAQAETTPPEINAQGCALLDASTGQVLFGKNEESTFEPA
STTKVMTALIALQKCKLDDEVTVQEDYLKVGGTGVGLLKGDVLTVRDLLYGLILHSDNTC
ANALADHISGNVDEFAKLMNEKAKELGATHTNFKNPSGMPDPEHITTAHDLALFLREAMN
NKIYMEISQTPSYTLTLKNAPTRTYPVNNKNYLINKNSRYFYQFAICGKDGYTTKSNHTY
VAAAEKDGHVLVAAFLNALDKDQNFHDMQSVFNYGFNNYSLVHLYKQGDEVSQYKITNNL
TIPVLSSKNIDYVVPKGKENSVTSEMKIDDKDLSKESFEKNDNILKGTVLVNGKNYMTVD
LQAGASHHYDLSVKALTENASPTVYIGSAAVILAGLFGIKKLVDIKSKK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaattttaaaaagaattaatatattatttttatttttattttgcttcgtctat
acaactgcacaagcggaaactactccacctgaaataaatgctcaaggttgtgccttactt
gacgcatctactggtcaagtactatttggtaaaaatgaagagtctacttttgaacctgcc
tcaacaactaaggtaatgactgctctaattgctttacaaaagtgtaagcttgatgacgaa
gtcactgttcaagaggattatctaaaggtaggcggaacaggtgtaggtttattaaaaggc
gatgtattaactgttcgtgatttactttatggtcttattttgcattctgataatacttgt
gcaaatgctttggctgatcatatttcaggaaatgtagatgaatttgctaaacttatgaat
gaaaaagctaaagaacttggtgctacacatacaaactttaagaatcctagtggtatgcct
gatcctgaacacataactacagcacatgatttagctctatttttaagagaagctatgaat
aataaaatatatatggaaatctctcagactccttcttacaccctaacattaaaaaatgct
ccaactagaacatatccagtaaataataagaattacttgattaataaaaattctagatat
ttttatcaatttgctatctgcggaaaagatgggtatactacaaagtcaaaccacacttat
gtagccgctgctgaaaaagatgggcatgtacttgtagctgcttttttaaatgcacttgac
aaagatcaaaatttccatgacatgcaatctgtttttaattatggatttaataattattct
ttagttcatctttataaacagggtgatgaagtttctcaatataaaataacaaataatctc
actataccagttttgagttcaaaaaatatagattatgttgttcctaaaggaaaagaaaat
tcagtaacttctgaaatgaaaattgatgataaagatttgagtaaagaatcctttgaaaaa
aatgataatattttaaagggaactgtattggttaatgggaaaaactatatgactgttgat
ttgcaggcaggagcttcacatcattatgatttatctgtgaaggctttaactgaaaacgct
tctcctactgtatatatcggcagtgcagcagtcattttagcaggattatttggaataaaa
aaactcgtagatattaaatctaaaaaatag
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