Clostridium saccharoperbutylacetonicum: Cspa_c53420
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Entry
Cspa_c53420 CDS
T02467
Name
(GenBank) transcriptional regulator, LacI family
KO
K26609
LacI family transcriptional regulator, galacturonate utilization repressor
Organism
csr
Clostridium saccharoperbutylacetonicum
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csr03000
]
Cspa_c53420
Transcription factors [BR:
csr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Cspa_c53420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_4
Peripla_BP_1
HTH_3
Phage_terminase
HTH_23
HTH_38
MarR_2
Xre-like-HTH
HTH_24
HTH_7
MarR
HTH_Tnp_ISL3
NUMOD1
Sigma70_r4
HTH_10
HTH_31
Sigma70_r4_2
Sigma54_DBD
Fe_dep_repress
TerS_C
HTH_Crp_2
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AGF59087
UniProt:
M1N6R0
LinkDB
All DBs
Position
complement(5920065..5921066)
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AA seq
333 aa
AA seq
DB search
MTTTIKDIAKVLNISHSTVSRALTGSKAVSEKTKEEIFKVAKELNYIPNMNARSLKIDKA
YNIGVFFSTIDNGTSPFVFQSVINNVYRNMDKKYNVIVKGIDMHEENTISPKNYDGILVL
SQKKGDDGFIEEIIDKKIPVVVINRKVSHKVINVYTDEKIGTSRGVEELIINGHKDIAII
EGPERFYSTKMRRDGCLEALEKYNIKLNEKLILHGDFSVKSGYLVTKKILNGKEKFTAIF
AFNDEMATGAIKAITDHGLKVPDDISVLGFDGNEIGKFITPSITTVIRPIGEIAKLGIEL
LMKLINGESEIIGKKIYIESKLSIGNSIRDIHI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaactatcaaggatatagcaaaagtacttaatatatctcattcaacagtttct
agggcgttaacaggatcgaaagctgttagtgagaaaactaaagaagaaatatttaaagta
gctaaagaattaaattatattcccaatatgaatgctagaagcttgaaaatagataaagct
tacaatataggtgtatttttttcaactattgataatggaacttcaccattcgtatttcaa
agtgtaataaataatgtatatagaaatatggataaaaagtataatgtaattgttaaaggt
attgatatgcatgaagaaaatacaataagtccaaaaaattatgatggaatattagtttta
agtcaaaaaaaaggtgatgatgggtttattgaagagattatagataaaaaaatacctgtt
gttgttattaataggaaagtaagtcataaagtcattaatgtgtatacagatgaaaagata
gggacttctagaggtgtagaagagttaataattaatggtcataaggatattgcaataatt
gaaggaccagaaagattttattcaaccaaaatgagaagagatgggtgtttagaagcgtta
gaaaaatataatattaaattaaatgaaaaattaatattacacggagattttagtgtaaaa
agtggttatttggtaactaaaaaaattcttaatggaaaagaaaaatttacagctatattt
gcatttaacgatgaaatggcaacaggagcaataaaggctattacagatcatggattaaaa
gtacctgatgatatttctgtattgggatttgatggaaatgaaataggaaaatttataact
cctagtataactactgttataaggccaattggggaaatagctaaattaggaatagaatta
ttgatgaaactaataaatggagagagcgaaataataggcaaaaaaatatatatagaatca
aaattatcaattggaaattctattagagacatacacatataa
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