Clostridium saccharoperbutylacetonicum: Cspa_c55040
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Entry
Cspa_c55040 CDS
T02467
Symbol
rumA2
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csr03009
]
Cspa_c55040 (rumA2)
Enzymes [BR:
csr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Cspa_c55040 (rumA2)
Ribosome biogenesis [BR:
csr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Cspa_c55040 (rumA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
Cons_hypoth95
PrmA
N6_N4_Mtase
Methyltransf_25
UPF0020
MTS
Methyltransf_11
TPMT
Motif
Other DBs
NCBI-ProteinID:
AGF59249
UniProt:
M1MN05
LinkDB
All DBs
Position
complement(6153936..6155300)
Genome browser
AA seq
454 aa
AA seq
DB search
MVEKNKEYIVKIISQGYEGEGVAKIEGYPIFVPGALKDETVKIEVIKKKKNYAYGKLVEV
IEECRMRKIPECINYDKCGGCSLMHSDYESQIDFKFNRVKDCIERIGGLSSEIVKVPIGM
KVPYRYRNKGIYSVGLTNGELSIGFLSEKSHEILDIETCHIQNEDSDRIIKIIKNWMLEY
SIEPANRDGIFYESGLIRNIMVRRGFKTDEIMVVIVTTNKKIPYKQELLDLLSNESKNLT
SIIQNINSKDTNLALGDKCITLWGKDFISDYIGKYKFNISPVSFFQVNPIQTEVLYNKAL
EYAELTGTEVVFDAYCGAGTISLFLSQKARKVYGVEIVEQAIDNAIINAKNNGITNSVFY
VGKSEEIIPKLIEDGIKPDVIVVDPPRKGCDVKLLDAIGKAEPKRVVYVSCDPSTLARDL
KYLEQLEYETVEVQPVDMFPMTKHIETVVKLIKK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggtagaaaaaaataaggaatacattgtgaagatcatttctcagggctatgaaggtgaa
ggcgttgcaaagatagaaggatatccaatatttgtcccaggagcactcaaggatgaaact
gtaaagatagaggtaattaaaaagaagaaaaactatgcttatgggaagcttgttgaagta
atagaagaatgtcgtatgagaaaaattccggagtgtattaattatgataagtgcggtgga
tgttcgttgatgcattcagattatgaaagtcagattgactttaaatttaatagagtaaaa
gattgtattgagagaataggtggcttatcatcagaaatagtgaaagttcctattggaatg
aaagttccgtatagatatagaaataaaggcatttactctgttggattgactaatggagaa
ctatcaataggatttcttagtgaaaagagccatgagattcttgatatagagacttgtcat
attcaaaatgaagactctgatagaattataaaaattataaagaattggatgctagaatat
tccatagaaccagctaatagggatgggattttttacgaatcaggtttaatcagaaatata
atggtcagaagaggtttcaagactgatgaaataatggttgtaatagtaactacaaataaa
aaaattccatataagcaggaattattagatttgctaagcaatgaaagtaaaaatttaacc
agtataattcaaaacataaattctaaggataccaatttagctttaggagataaatgcatc
actttatggggaaaagatttcatatcagattatataggaaaatataaatttaacatatca
ccagtttctttttttcaagtaaatccaattcaaacagaagtattatataataaagcttta
gaatatgctgagttaactggaactgaagtggtttttgatgcttattgtggtgccggaaca
atatcattatttttgtctcaaaaagcaagaaaagtttatggtgttgaaatagttgagcaa
gcaattgataatgcaataataaatgccaaaaataatggaattacaaactctgtattctat
gtggggaaatcagaagaaataatacctaaattgattgaagatggaattaaaccagatgtt
atagttgttgatccaccaagaaagggttgcgatgttaaattattagatgcaattggaaag
gctgaacctaaaagagtagtttatgtatcttgcgatccaagcactttggcaagggattta
aagtacttagagcagttagagtatgagacagtggaagttcagcctgtcgatatgttccca
atgacgaagcatatagaaacagtagttaaattaattaagaaatag
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