Clostridium saccharoperbutylacetonicum: Cspa_c55490
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Entry
Cspa_c55490 CDS
T02467
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase Ung
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cspa_c55490 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csr03400
]
Cspa_c55490 (ung)
Enzymes [BR:
csr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Cspa_c55490 (ung)
DNA repair and recombination proteins [BR:
csr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cspa_c55490 (ung)
Prokaryotic type
Cspa_c55490 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
AGF59293
UniProt:
M1MT54
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All DBs
Position
6206949..6207626
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AA seq
225 aa
AA seq
DB search
MSEILKNDWKNYLESEFQKDYYLKLRKFLVNEYNSKIIYPNMYDLFNALHFTPYKDVKVV
ILGQDPYHGPNQAHGLSFSVNPGVKAPPSLVNMYKELHTDLGCYIPNNGYLKKWADQGVL
LLNTVLTVRAGEANSHRNKGWEEFTTKIITVLNEKETPIVFILWGNNAISKTSLITNPKH
LILKSVHPSPLSASRGFFGSKPFSKTNEFLTSTGQTPIDWQIENI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaatattaaaaaatgattggaaaaactatttagaatctgaatttcaaaaagat
tattatcttaaattaagaaaatttttagtaaacgaatataattcaaagattatttatcct
aatatgtacgacctttttaacgcattacatttcacaccttataaagatgtgaaagtcgtt
atattgggtcaagacccttatcatggtccaaatcaagctcacggtctaagtttttctgtt
aacccaggagtaaaagcacctccatctttagttaatatgtacaaagaacttcatacagat
ctaggatgttatattccaaacaatggttatttaaaaaaatgggctgatcaaggagtttta
ttattaaatacagttcttacagttagagccggtgaagctaattctcatagaaataaaggt
tgggaagagtttactactaaaattattaccgttttaaatgaaaaagaaacccctatagtg
tttattctatggggtaataacgctatttcgaaaactagcttaattactaatcctaagcat
cttatcttgaaatcagtgcatccgagtcctctatcagcttcaagaggttttttcggcagc
aaacctttttcaaaaacaaacgaatttttaacttcaacaggtcaaacacctatagattgg
caaattgaaaacatataa
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